RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SLC7A5P1Q8MH63 180 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PEX13Q92968 403 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TAMM41Q96BW9 452 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 OTUB1Q96FW1 271 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 TRMT2BQ96GJ1 504 aaKnown RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 MUS81Q96NY9 551 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 SORBS1Q9BX66 1292 aaKnown RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 POPDC3Q9HBV1 291 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 CCM2LQ9NUG4 571 aaPredicted RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PTBP2Q9UKA9 531 aaKnown RBP15.14■□□□□ 0.01
SCARF1-203ENST00000434376 PCDHB14Q9Y5E9 798 aa15.14■□□□□ 0.01
SCARF1-203ENST00000434376 MYO10Q9HD67 2058 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 NOTCH4Q99466 2003 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 FADS2P1A8MWK0 482 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 RFXANKO14593 260 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 SERPINA1P01009 418 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 FGBP02675 491 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 COX7A2P14406 83 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 MATN1P21941 496 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 DNASE1L3Q13609 305 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 BTLAQ7Z6A9 289 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 VTCN1Q7Z7D3 282 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 TRPV3Q8NET8 790 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 MAGED4Q96JG8 741 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 LRRC3Q9BY71 257 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 EPS8L2Q9H6S3 715 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 AMBNQ9NP70 447 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 POLE4Q9NR33 117 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 IFT80Q9P2H3 777 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-203ENST00000434376 DOCK9Q9BZ29 2069 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 TRBV23OR9-2A0A075B6M9 112 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 SERPINB7O75635 380 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 CTSLP07711 333 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
SCARF1-203ENST00000434376 RPS14P62263 151 aaKnown RBP15.13■□□□□ 0.01
SCARF1-203ENST00000434376 PHC1P78364 1004 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 CYP4F3Q08477 520 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 CCDC81Q6ZN84 652 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 CCDC149Q6ZUS6 474 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 ANKRD33Q7Z3H0 272 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 ZNF740Q8NDX6 193 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 OR52J3Q8NH60 311 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 OVCA2Q8WZ82 227 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 SDCCAG3Q96C92 435 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 PPP3R2Q96LZ3 170 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 HEPHQ9BQS7 1158 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 C9orf16Q9BUW7 83 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 OR51B5Q9H339 312 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 C5AR2Q9P296 337 aa15.13■□□□□ 0.01
SCARF1-203ENST00000434376 CACNA1IQ9P0X4 2223 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 OTOL1A6NHN0 477 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 MITFO75030 526 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 NKG7Q16617 165 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 XKR7Q5GH72 579 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 NECAB2Q7Z6G3 386 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 C7orf61Q8IZ16 206 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 MINDY1Q8N5J2 469 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 FRS2Q8WU20 508 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 NXPE3Q969Y0 559 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 SH3KBP1Q96B97 665 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ZBP1Q9H171 429 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 TBCCD1Q9NVR7 557 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 C1orf109Q9NX04 203 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 TMEM221A6NGB7 291 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 BBIP1A8MTZ0 92 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 RFXAPO00287 272 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 XYLBO75191 536 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 PCDH8O95206 1070 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 NUDT7P0C024 238 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 MAT2AP31153 395 aaKnown RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 HOXD12P35452 270 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ALDH9A1P49189 494 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 PDCD4Q53EL6 469 aaKnown RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 CATSPEREQ5SY80 951 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 SULT1C3Q6IMI6 304 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 HTR3DQ70Z44 454 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 JPH3Q8WXH2 748 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 HHIPL1Q96JK4 782 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 SAMD11Q96NU1 681 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 SLC25A37Q9NYZ2 338 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ACSL6Q9UKU0 697 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 OARD1Q9Y530 152 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 RPS9P46781 194 aaKnown RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ACSM2AQ08AH3 577 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ARHGAP15Q53QZ3 475 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 ACSM2BQ68CK6 577 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 DLEU7Q6UYE1 221 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 NETO1Q8TDF5 533 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 FATE1Q969F0 183 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 CENPNQ96H22 339 aaPredicted RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 MACROD1Q9BQ69 325 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 EMILIN2Q9BXX0 1053 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 REXO4Q9GZR2 422 aaKnown RBP15.12■□□□□ 0.01
SCARF1-203ENST00000434376 SGK2Q9HBY8 427 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 RASSF1Q9NS23 344 aa15.12■□□□□ 0.01
SCARF1-203ENST00000434376 RTCAO00442 366 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 ANXA6P08133 673 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms