RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RFX2P48378 723 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 HSPA7P48741 367 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 TGM4P49221 684 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GLUD2P49448 558 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACOT2P49753 483 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 RGS6P49758 472 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GMPSP49915 693 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLCN5P51795 746 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SESN2P58004 480 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CSTF1Q05048 431 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPP2Q13103 211 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 RPA4Q13156 261 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 FGL2Q14314 439 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LTB4RQ15722 352 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR162Q16538 588 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 KYAT1Q16773 422 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SMTNL2Q2TAL5 461 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 QRICH1Q2TAL8 776 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CTU2Q2VPK5 515 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR33Q49SQ1 333 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATP13A5Q4VNC0 1218 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATP6AP1LQ52LC2 224 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PYDC2Q56P42 97 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 KIAA0319Q5VV43 1072 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 B3GNTL1Q67FW5 361 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPAT2Q6NUI2 795 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LLGL2Q6P1M3 1020 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF549Q6P9A3 640 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 UQCC3Q6UW78 93 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM198BQ6UWH4 519 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARHGAP36Q6ZRI8 547 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP50Q70EL3 339 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF534Q76KX8 674 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 DNAJB7Q7Z6W7 309 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 RNF180Q86T96 592 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM135Q86UB9 458 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LHFPL3Q86UP9 236 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LDHDQ86WU2 507 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZSWIM9Q86XI8 627 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC44A2Q8IWA5 706 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 C4orf19Q8IY42 314 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 FSTL5Q8N475 847 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 DNAAF3Q8N9W5 541 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRPV1Q8NER1 839 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR2T12Q8NG77 320 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR4F6Q8NGB9 312 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR52H1Q8NGJ2 320 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADAMTS14Q8WXS8 1223 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACOT12Q8WYK0 555 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATOH1Q92858 354 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAD51AP1Q96B01 352 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 LENG9Q96B70 501 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 TCEAL4Q96EI5 215 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SIPA1Q96FS4 1042 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PPP1R36Q96LQ0 422 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 AGAP2Q99490 1192 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 C7orf50Q9BRJ6 194 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 NTPCRQ9BSD7 190 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 MED18Q9BUE0 208 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GSDMCQ9BYG8 508 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR63Q9BZJ6 419 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 RIBC2Q9H4K1 309 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 EQTNQ9NQ60 294 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ABCC13Q9NSE7 274 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SDHAF2Q9NX18 166 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 CMTM6Q9NX76 183 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SMPD4Q9NXE4 827 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 STOX2Q9P2F5 926 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 AASSQ9UDR5 926 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC23A1Q9UHI7 598 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PURGQ9UJV8 347 aaKnown RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 MGAT4AQ9UM21 535 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SSR3Q9UNL2 185 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 ALG5Q9Y673 324 aa5.47□□□□□ -1.53
VTI1BP4-201ENST00000427516 SSC5DA1L4H1 1573 aa5.46□□□□□ -1.53
VTI1BP4-201ENST00000427516 SBF2Q86WG5 1849 aa5.46□□□□□ -1.53
VTI1BP4-201ENST00000427516 IGKV6D-41A0A0C4DH26 115 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRAPPC13A5PLN9 417 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MFSD2BA6NFX1 497 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 A8MV72 311 aaPredicted RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 A8MXK9 166 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF670-ZNF695F2Z2N8 137 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 INMT-MINDY4F8WBC2 141 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 H0YIN7 160 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 FXYD1O00168 92 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARNTLO00327 626 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 MEIS2O14770 477 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AZIN1O14977 448 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 CASC3O15234 703 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPM1DO15297 605 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 LYRM1O43325 122 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SGCEO43556 437 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 AKAP8O43823 692 aaKnown RBP5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 EDIL3O43854 480 aa5.46□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC28A2O43868 658 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms