RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 CPSF7Q8N684 471 aaKnown RBP16.54■□□□□ 0.24
CHEK1-202ENST00000427383 WDR20Q8TBZ3 569 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 SLC37A2Q8TED4 501 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 CXorf40BQ96DE9 158 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 XKR8Q9H6D3 395 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 PFDN4Q9NQP4 134 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
CHEK1-202ENST00000427383 SERTM1A2A2V5 107 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 OR5K4A6NMS3 321 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 LSM1O15116 133 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 KDM1AO60341 852 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ULK1O75385 1050 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 KRT6AP02538 564 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 KRT6BP04259 564 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 T-ENOLP0DO92 83 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 NCF2P19878 526 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PSMB5P28074 263 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 KRT6CP48668 564 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 HNRNPKP61978 463 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 KRT72Q14CN4 511 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ELOCQ15369 112 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 FRG2Q64ET8 278 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZFPM2Q8WW38 1151 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 TUBGCP3Q96CW5 907 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PTCD3Q96EY7 689 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 FRG2BQ96QU4 278 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 TMEM74BQ9NUR3 256 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 GIMAP2Q9UG22 337 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 TAC3Q9UHF0 121 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZNF490Q9ULM2 529 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 SNX6Q9UNH7 406 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 DYRK1BQ9Y463 629 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PI4KAP42356 2102 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 A0A1B0GTW7 788 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PRR5-ARHGAP8B1AHC4 643 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 VARSP26640 1264 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PEBP1P30086 187 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 SHMT2P34897 504 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 YBX1P67809 324 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZNF33BQ06732 778 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 TSTA3Q13630 321 aaPredicted RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 ZNF528Q3MIS6 628 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 THEMIS2Q5TEJ8 643 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 NXPE4Q6UWF7 544 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 FAM129CQ86XR2 697 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 OR2A1Q8NGT9 310 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 CATSPER2Q96P56 530 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 OR6C2Q9NZP2 312 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 CPNE7Q9UBL6 633 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 PILRBQ9UKJ0 227 aa16.53■□□□□ 0.24
CHEK1-202ENST00000427383 COPG1Q9Y678 874 aaKnown RBP16.53■□□□□ 0.24
CHEK1-202ENST00000427383 NPIPB8E9PQR5 432 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 SLC22A2O15244 555 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 KIAA0754O94854 1291 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 PDYNP01213 254 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 C1GALT1C1LP0DN25 315 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 SLC2A4P14672 509 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 CTSKP43235 329 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 HNRNPH2P55795 449 aaKnown RBP16.52■□□□□ 0.23
CHEK1-202ENST00000427383 C21orf59P57076 290 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 BNC1Q01954 994 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 DMTNQ08495 405 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 GPR18Q14330 331 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 AMIGO1Q86WK6 493 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 SDR16C5Q8N3Y7 309 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 ABHD11Q8NFV4 315 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 MARK4Q96L34 752 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 ACAT2Q9BWD1 397 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 ACPTQ9BZG2 426 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 SPNS1Q9H2V7 528 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 ELOVL6Q9H5J4 265 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 ARL8BQ9NVJ2 186 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 RIC8BQ9NVN3 520 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.23
CHEK1-202ENST00000427383 SPASTQ9UBP0 616 aa16.52■□□□□ 0.23
CHEK1-202ENST00000427383 TRBV23OR9-2A0A075B6M9 112 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 IGKV1-8A0A0C4DH67 115 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 A0A1B0GVT2 93 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 PIPSLA2A3N6 862 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 LMO7DNF2Z398 122 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 UBDO15205 165 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 AQP9O43315 295 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 PIAS2O75928 621 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 UNC5CO95185 931 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 CBX6O95503 412 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 CDH1P12830 882 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 LBPP18428 481 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 ADSLP30566 484 aaPredicted RBP16.51■□□□□ 0.23
CHEK1-202ENST00000427383 CNR2P34972 360 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 SLBPQ14493 270 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHEK1-202ENST00000427383 TEAD4Q15561 434 aa16.51■□□□□ 0.23
CHEK1-202ENST00000427383 ZNF423Q2M1K9 1284 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms