RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 A0A1W2PPM1 405 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 hCG_2039718K7EN88 272 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 ITGB1P05556 798 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CORO1AP31146 461 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MARCKSL1P49006 195 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CRHR2Q13324 411 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 OR5J2Q8NH18 312 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 PCDHB18PQ96TA0 734 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 SLC38A3Q99624 504 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 UCK2Q9BZX2 261 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 IFNA4P05014 189 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 PIRTP0C851 137 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 EDNRAP25101 427 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 ADH6P28332 368 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CD47Q08722 323 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 TRIM74Q86UV6 250 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 TRIM73Q86UV7 250 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 FCAMRQ8WWV6 532 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 KLHL15Q96M94 604 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 COQ10BQ9H8M1 238 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 FBXW2Q9UKT8 454 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CRISP1P54107 249 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 TAS2R40P59535 323 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 GNG2P59768 71 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 SLC29A4Q7RTT9 530 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 FAM86B1Q8N7N1 296 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 GALNT6Q8NCL4 622 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 ELP5Q8TE02 316 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 BORCS8Q96FH0 119 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 RIOK2Q9BVS4 552 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MMP27Q9H306 513 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MYH7BA7E2Y1 1941 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 AGPSO00116 658 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 AHCYP23526 432 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ICAM3P32942 547 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SOX9P48436 509 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 HSPA7P48741 367 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ZNF829Q3KNS6 432 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ZER1Q7Z7L7 766 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 STON2Q8WXE9 905 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 KCTD13Q8WZ19 329 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 DNAJC19Q96DA6 116 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ZNF599Q96NL3 588 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 OR5B12Q96R08 314 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 K7EPI3 171 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 DNAJB6O75190 326 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TSTD2Q5T7W7 516 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 POMZP3Q6PJE2 187 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 WFIKKN2Q8TEU8 576 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 GAL3ST4Q96RP7 486 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 KIF1AQ12756 1690 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ATP6V1G1O75348 118 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 IFI30P13284 250 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 VAMP1P23763 118 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ACTC1P68032 377 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 FKBP1BP68106 108 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ACTA1P68133 377 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ST3GAL3Q11203 375 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 NPTX1Q15818 432 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 POM121L1PQ3SYA9 428 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 GPR153Q6NV75 609 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 XYLT1Q86Y38 959 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ZBTB8BQ8NAP8 495 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TRAPPC12Q8WVT3 735 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SLC5A7Q9GZV3 580 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 IGSF9Q9P2J2 1179 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SPEF2Q9C093 1822 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 C9J4A7 227 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 CILPO75339 1184 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SCGB1D2O95969 90 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 MLLT6P55198 1093 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TLE3Q04726 772 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 COL28A1Q2UY09 1125 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SLC36A4Q6YBV0 504 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 FTMTQ8N4E7 242 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SHKBP1Q8TBC3 707 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 RIMKLBQ9ULI2 386 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 DDTLA6NHG4 134 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 PSMD9O00233 223 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ARPC2O15144 300 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 IRAK2O43187 625 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 GRID2O43424 1007 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 DSTNP60981 165 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SH3PXD2AQ5TCZ1 1133 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TMEM80Q96HE8 168 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 HAPLN3Q96S86 360 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 RPS2P15880 293 aaKnown RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 SELENOVP59797 346 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 CLEC6AQ6EIG7 209 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 KLHDC10Q6PID8 442 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 ANKRD23Q86SG2 305 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TMEM110Q86TL2 294 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 EXOC2Q96KP1 924 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 CFAP97Q9P2B7 532 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 TEX13DA0A0J9YY54 714 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 PIP5K1BO14986 540 aa14.11□□□□□ -0.15
PTPN13-203ENST00000427191 DDNO94850 711 aaPredicted RBP14.11□□□□□ -0.15
PTPN13-203ENST00000427191 RASGRP1O95267 797 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms