RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 SLC7A4O43246 635 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SLC22A5O76082 557 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 ALAS2P22557 587 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 FDXRP22570 491 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 LMO2P25791 158 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GEMP55040 296 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CSNK2BP67870 215 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GPR19Q15760 415 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 PM20D1Q6GTS8 502 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ZNF549Q6P9A3 640 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GPC2Q8N158 579 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SLC13A3Q8WWT9 602 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ESAMQ96AP7 390 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 MRGPRX2Q96LB1 330 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 TSGA13Q96PP4 275 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 PPP1R16BQ96T49 567 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 HEBP1Q9NRV9 189 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SIRT5Q9NXA8 310 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 POLR3HQ9Y535 204 aaPredicted RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CLCA1A8K7I4 914 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 OR4F21O95013 312 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RPS17P08708 135 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 SLC10A3P09131 477 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CHMP24386 653 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 MAGEA2P43356 314 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ARSDP51689 593 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GLCCI1Q86VQ1 547 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SPATA9Q9BWV2 254 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ZNF490Q9ULM2 529 aaPredicted RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 BTN3A3O00478 584 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CD3EAPO15446 510 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 WDR47O94967 919 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ZNF682O95780 498 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CSF3P09919 207 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 CLCN3P51790 818 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SRP54P61011 504 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 B2MP61769 119 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 KIAA0040Q15053 153 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 CACHD1Q5VU97 1274 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 FAM160B1Q5W0V3 765 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CCDC149Q6ZUS6 474 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RNF130Q86XS8 419 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 STX19Q8N4C7 294 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RHEBL1Q8TAI7 183 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 CNPPD1Q9BV87 410 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 ERVMER34-1Q9H9K5 563 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 OLA1Q9NTK5 396 aaKnown RBP12.85□□□□□ -0.35
CALD1-205ENST00000422748 GALPQ9UBC7 116 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
CALD1-205ENST00000422748 GPX5O75715 221 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 FPR1P21462 350 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 CPN2P22792 545 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 RPS3P23396 243 aaKnown RBP eCLIP12.84□□□□□ -0.35
CALD1-205ENST00000422748 DNAJA1P31689 397 aaKnown RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 BRCC3P46736 316 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 TGM4P49221 684 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 FAM131AQ6UXB0 335 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 NPAS4Q8IUM7 802 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 DNAJA4Q8WW22 397 aaPredicted RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 OR5M11Q96RB7 305 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 TFB2MQ9H5Q4 396 aaKnown RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 ZNF224Q9NZL3 707 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 TSC2P49815 1807 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 PHIPQ8WWQ0 1821 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 PLA2G10O15496 165 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 ECI2O75521 394 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 HLA-DQB2P05538 268 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 CNPP09543 421 aaKnown RBP12.84□□□□□ -0.35
CALD1-205ENST00000422748 CXCR3P49682 368 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 HTR6P50406 440 aa12.84□□□□□ -0.35
CALD1-205ENST00000422748 KCNQ1P51787 676 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms