RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZNF552Q9H707 407 aaPredicted RBP9.03□□□□□ -0.96
NUP50-205ENST00000419387 WDR54Q9H977 334 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 INTS10Q9NVR2 710 aaKnown RBP9.03□□□□□ -0.96
NUP50-205ENST00000419387 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 GALPQ9UBC7 116 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
NUP50-205ENST00000419387 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
NUP50-205ENST00000419387 FAM169AQ9Y6X4 670 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 CCDC88CQ9P219 2028 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 FER1L5A0AVI2 2057 aa9.03□□□□□ -0.96
NUP50-205ENST00000419387 RELNP78509 3460 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 LOC105369274A0A096LPK9 316 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 LOC102723532A0A0G2JNH3 316 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 A0A0J9YVX5 310 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 HYKKA2RU49 373 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 ARHGEF33A8MVX0 844 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 MASP2O00187 686 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 USP1O94782 785 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 ERGP11308 486 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 CMPK1P30085 196 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 HSD17B2P37059 387 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 OR1D4P47884 311 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 ARHGAP19Q14CB8 494 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 ACSBG2Q5FVE4 666 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 FHL5Q5TD97 284 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 FBXO42Q6P3S6 717 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 IGFL3Q6UXB1 125 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 RNF44Q7L0R7 432 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 OR4N4Q8N0Y3 316 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 MCUQ8NE86 351 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 SMPDL3AQ92484 453 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 OSBPL9Q96SU4 736 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 SPSB2Q99619 263 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 TRIM56Q9BRZ2 755 aaKnown RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 DPH7Q9BTV6 452 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 XAB2Q9HCS7 855 aaKnown RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 LUZP4Q9P127 313 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 KLHL42Q9P2K6 505 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 CDC23Q9UJX2 597 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 NXT1Q9UKK6 140 aaKnown RBP9.02□□□□□ -0.97
NUP50-205ENST00000419387 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 DOPEY2Q9Y3R5 2298 aa9.02□□□□□ -0.97
NUP50-205ENST00000419387 ZCWPW2A0A1B0GU75 182 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 BLACEA4D250 179 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 OR2A25A4D2G3 310 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CTAGE9A4FU28 777 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 VSTM2BA6NLU5 285 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ZNF839A8K0R7 811 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 TCP11X1B4DZS4 312 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 MYO1CO00159 1063 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CES2O00748 559 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SOCS6O14544 535 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 KIF5CO60282 957 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CATP04040 527 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 EIF2S1P05198 315 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 GP1BBP13224 206 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ITGA3P26006 1051 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 RPA3P35244 121 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 CLCN7P51798 805 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 GNG11P61952 73 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 YBX1P67809 324 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 CTBP1Q13363 440 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CYP1B1Q16678 543 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 TTLL9Q3SXZ7 439 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 PRAMEF13Q5VWM6 474 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ZNF470Q6ECI4 717 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 PRMT9Q6P2P2 845 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CCDC137Q6PK04 289 aaKnown RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 SUSD1Q6UWL2 747 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 KIRREL2Q6UWL6 708 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SHISA6Q6ZSJ9 500 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 NEK10Q6ZWH5 1172 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 CREG2Q8IUH2 290 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 DENND6AQ8IWF6 608 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 LMNTD2Q8IXW0 634 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 IQCKQ8N0W5 287 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ZADH2Q8N4Q0 377 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 METTL27Q8N6F8 245 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 ACTRT1Q8TDG2 376 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 TM9SF4Q92544 642 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 C19orf60Q96EN9 201 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 VPS50Q96JG6 964 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SERPINB12Q96P63 405 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 NAP1L3Q99457 506 aaPredicted RBP9.01□□□□□ -0.97
NUP50-205ENST00000419387 PKP4Q99569 1192 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SLC30A3Q99726 388 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ZFYVE21Q9BQ24 234 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 PLCD4Q9BRC7 762 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 ACAT2Q9BWD1 397 aa9.01□□□□□ -0.97
NUP50-205ENST00000419387 SLC29A3Q9BZD2 475 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms