RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PLTPP55058 493 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 SOX8P57073 446 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 KCNK10P57789 538 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 CUL1Q13616 776 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 POU6F1Q14863 301 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ARMC3Q5W041 872 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ZDHHC24Q6UX98 284 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 LINC00696Q6ZRV3 163 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 TTLL10Q6ZVT0 673 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ZNF534Q76KX8 674 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 FJX1Q86VR8 437 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 PRSS58Q8IYP2 241 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ELMO1Q92556 727 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 TXLNGQ9NUQ3 528 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 EURLQ9NYK6 297 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 MAU2Q9Y6X3 613 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 CCDC168Q8NDH2 2452 aa12.37□□□□□ -0.43
LINC00339-202ENST00000416769 SLC5A10A0PJK1 596 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 MAGEB16A2A368 324 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 SDR42E2A6NKP2 422 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 GOLGA8MH3BSY2 632 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 WISP2O76076 250 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 F10P00742 488 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 TUBBP07437 444 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 MMP11P24347 488 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 ADRA1DP25100 572 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 SHMT2P34897 504 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 MAGEA3P43357 314 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 CARSP49589 748 aaKnown RBP12.36□□□□□ -0.43
LINC00339-202ENST00000416769 ARL4CP56559 192 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 GRB7Q14451 532 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 ZRSR2Q15696 482 aaKnown RBP12.36□□□□□ -0.43
LINC00339-202ENST00000416769 NKG7Q16617 165 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 PRAMEF13Q5VWM6 474 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 PDIK1LQ8N165 341 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 DNAJB14Q8TBM8 379 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 FBXO25Q8TCJ0 367 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 CDKN2AIPNLQ96HQ2 116 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 NDC1Q9BTX1 674 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 ZDHHC18Q9NUE0 388 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 NLE1Q9NVX2 485 aaPredicted RBP12.36□□□□□ -0.43
LINC00339-202ENST00000416769 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
LINC00339-202ENST00000416769 IQCF5A8MTL0 148 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 FFAR3O14843 346 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 GPR42O15529 346 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 MAP3K7O43318 606 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 CELA2AP08217 269 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 PKLRP30613 574 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 FOXN2P32314 431 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SESN2P58004 480 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 CDC16Q13042 620 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 RPA4Q13156 261 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SEMA3AQ14563 771 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 ZNF169Q14929 603 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 GPR33Q49SQ1 333 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 WDR93Q6P2C0 686 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 TLDC1Q6P9B6 456 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 IGFL2Q6UWQ7 119 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 CEP128Q6ZU80 1094 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 MCATQ8IVS2 390 aaKnown RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SHISA5Q8N114 240 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 OR5K2Q8NHB8 316 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 PPP4R1Q8TF05 950 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 FAR1Q8WVX9 515 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 C8orf44Q96CB5 159 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 LRRC39Q96DD0 335 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SIGLEC10Q96LC7 697 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 TAAR6Q96RI8 345 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 PHACTR1Q9C0D0 580 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SYNPO2LQ9H987 977 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 AGPAT4Q9NRZ5 378 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 PLA2G3Q9NZ20 509 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
LINC00339-202ENST00000416769 SLC2A6Q9UGQ3 507 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 RIMKLBQ9ULI2 386 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
LINC00339-202ENST00000416769 A0A1B0GX78 115 aa12.34□□□□□ -0.43
LINC00339-202ENST00000416769 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
LINC00339-202ENST00000416769 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms