RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KCNMB2Q9Y691 235 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 TNRC6AQ8NDV7 1962 aaKnown RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 NUP210LQ5VU65 1888 aa14.21□□□□□ -0.14
LIMS4-201ENST00000413601 MED13Q9UHV7 2174 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 A0A0J9YVX5 310 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 PIAS1O75925 651 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 SFTPCP11686 197 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 FDXRP22570 491 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 IMPA1P29218 277 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 SSTR1P30872 391 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 PLTPP55058 493 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 VSX2P58304 361 aaPredicted RBP14.2□□□□□ -0.14
LIMS4-201ENST00000413601 IL2P60568 153 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
LIMS4-201ENST00000413601 KCNAB2Q13303 367 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 NCF4Q15080 339 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 UGT8Q16880 541 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 FRMPD2BQ6IN97 320 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 FAM45BPQ6NSW5 357 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 PALM2Q8IXS6 379 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 LRRC56Q8IYG6 542 aaPredicted RBP14.2□□□□□ -0.14
LIMS4-201ENST00000413601 MYO1HQ8N1T3 1032 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 FAM45AQ8TCE6 357 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 MCOLN3Q8TDD5 553 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF592Q92610 1267 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 ADNPQ9H2P0 1102 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 TCFL5Q9UL49 500 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 SNX7Q9UNH6 387 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 PDE10AQ9Y233 779 aa14.2□□□□□ -0.14
LIMS4-201ENST00000413601 PCSK5Q92824 1860 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 LOC105369274A0A096LPK9 316 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 IGKV1-8A0A0C4DH67 115 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 LOC102723532A0A0G2JNH3 316 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 OR2A25A4D2G3 310 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 C9J4A7 227 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 EIF3HO15372 352 aaKnown RBP eCLIP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 TSPAN12O95859 305 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 C8GP07360 202 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SAT1P21673 171 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 ALAS2P22557 587 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 GCGRP47871 477 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 DCDP81605 110 aaKnown RBP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SLC7A5Q01650 507 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 PRDX1Q06830 199 aaKnown RBP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 NFATC3Q12968 1075 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SLC9A5Q14940 896 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 TCTE1Q5JU00 501 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 WASHC2DQ5SRD0 308 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 MLIPQ5VWP3 458 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 ICE2Q659A1 982 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 FBXO42Q6P3S6 717 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 MBOAT1Q6ZNC8 495 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 TTLL10Q6ZVT0 673 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SLC26A11Q86WA9 606 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 ZC3HC1Q86WB0 502 aaKnown RBP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 OR4N4Q8N0Y3 316 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 FBXO25Q8TCJ0 367 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 PROKR1Q8TCW9 393 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 CCDC138Q96M89 665 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 ZNF285Q96NJ3 590 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 FAM117AQ9C073 453 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 PARVBQ9HBI1 364 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SMYD2Q9NRG4 433 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 STOX2Q9P2F5 926 aaPredicted RBP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 NDOR1Q9UHB4 597 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 MAN2B2Q9Y2E5 1009 aa14.19□□□□□ -0.14
LIMS4-201ENST00000413601 SMG1Q96Q15 3661 aaKnown RBP14.19□□□□□ -0.14
LIMS4-201ENST00000413601 FAM95CA0A1B0GW59 222 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 SLC16A5O15375 505 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 SRPX2O60687 465 aaPredicted RBP14.18□□□□□ -0.14
LIMS4-201ENST00000413601 CCNDBP1O95273 360 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 ARSFP54793 590 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 CAV1Q03135 178 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 SP140Q13342 867 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 GRM7Q14831 915 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 NAA25Q14CX7 972 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 PHKG1Q16816 387 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 NKAIN1Q4KMZ8 207 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 ZDHHC24Q6UX98 284 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 RNF44Q7L0R7 432 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 PAQR7Q86WK9 346 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 CCDC25Q86WR0 208 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 TTC29Q8NA56 475 aaPredicted RBP14.18□□□□□ -0.14
LIMS4-201ENST00000413601 ADAMTS17Q8TE56 1095 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 ZFYVE21Q9BQ24 234 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 LRRC1Q9BTT6 524 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 SLC25A18Q9H1K4 315 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 CUTCQ9NTM9 273 aa14.18□□□□□ -0.14
LIMS4-201ENST00000413601 IFT80Q9P2H3 777 aaPredicted RBP14.18□□□□□ -0.14
LIMS4-201ENST00000413601 GPN3Q9UHW5 284 aaPredicted RBP14.18□□□□□ -0.14
LIMS4-201ENST00000413601 A0A1B0GX78 115 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 ESYT3A0FGR9 886 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 CXorf49A8MYA2 514 aaPredicted RBP14.17□□□□□ -0.14
LIMS4-201ENST00000413601 B8ZZF3 427 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 DSCR3O14972 297 aa14.17□□□□□ -0.14
LIMS4-201ENST00000413601 KLF7O75840 302 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms