RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TERF1P54274 439 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 FOXL2P58012 376 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 OCA2Q04671 838 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 THOC5Q13769 683 aaKnown RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 DHX34Q14147 1143 aaKnown RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 RBBP7Q16576 425 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 MUM1Q2TAK8 710 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 TUBB8Q3ZCM7 444 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 ZNF470Q6ECI4 717 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 NEK10Q6ZWH5 1172 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 LMNTD2Q8IXW0 634 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 COG1Q8WTW3 980 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 FAM136AQ96C01 138 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 SOX17Q9H6I2 414 aaPredicted RBP14.1□□□□□ -0.15
CBX3-203ENST00000409747 ZNF304Q9HCX3 659 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 CTSFQ9UBX1 484 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 PPP2R2CQ9Y2T4 447 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 HS3ST3B1Q9Y662 390 aa14.1□□□□□ -0.15
CBX3-203ENST00000409747 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 SDR42E2A6NKP2 422 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 VSTM2BA6NLU5 285 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 ARHGEF33A8MVX0 844 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 TCP11X1B4DZS4 312 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 PRPF4O43172 522 aaKnown RBP eCLIP14.09□□□□□ -0.15
CBX3-203ENST00000409747 AVILO75366 819 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 OR1D4P47884 311 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 EMP3P54852 163 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 PLEKHN1Q494U1 663 aaPredicted RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 ACSBG2Q5FVE4 666 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 AGAP7PQ5VUJ5 663 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 FRMPD2BQ6IN97 320 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 CENPUQ71F23 418 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 CAND1Q86VP6 1230 aaKnown RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 RASGEF1CQ8N431 466 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 MCUQ8NE86 351 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 SSC4DQ8WTU2 575 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 MAGOHBQ96A72 148 aaKnown RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 ZNF669Q96BR6 464 aaPredicted RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 PBKQ96KB5 322 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 AGAP4Q96P64 663 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 DPH7Q9BTV6 452 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 MRPS30Q9NP92 439 aaKnown RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 KLHL42Q9P2K6 505 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 ZNF282Q9UDV7 671 aaPredicted RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 ZC3H7BQ9UGR2 993 aaKnown RBP14.09□□□□□ -0.15
CBX3-203ENST00000409747 JRKLQ9Y4A0 524 aa14.09□□□□□ -0.15
CBX3-203ENST00000409747 KRT87PA6NCN2 255 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 SOCS6O14544 535 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 CCZ1BP86790 482 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 CCZ1P86791 482 aaPredicted RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 Q6ZS92 163 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 METTL27Q8N6F8 245 aaPredicted RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 CALML6Q8TD86 181 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 PPP4R1Q8TF05 950 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 KCNJ9Q92806 393 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 MIEF2Q96C03 454 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 SNRNP40Q96DI7 357 aaKnown RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 WDR77Q9BQA1 342 aaPredicted RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 CRB3Q9BUF7 120 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 ACAT2Q9BWD1 397 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 COMMD10Q9Y6G5 202 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 MAU2Q9Y6X3 613 aa14.08□□□□□ -0.16
CBX3-203ENST00000409747 UTP20O75691 2785 aaKnown RBP14.08□□□□□ -0.16
CBX3-203ENST00000409747 ENO3P13929 434 aaPredicted RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 FBLP22087 321 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 CLCN7P51798 805 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 PNLIPRP1P54315 467 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 ANKRD22Q5VYY1 191 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 KIRREL2Q6UWL6 708 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 SHISA6Q6ZSJ9 500 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 FBXO15Q8NCQ5 510 aaPredicted RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 CABS1Q96KC9 395 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 SERPINB12Q96P63 405 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 LHPPQ9H008 270 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 EPS8L2Q9H6S3 715 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 LOC105369274A0A096LPK9 316 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 LOC102723532A0A0G2JNH3 316 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 TXNDC9O14530 226 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 MAP2K7O14733 419 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 DDAH2O95865 285 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 ZGLP1P0C6A0 271 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 ACPPP15309 386 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 EZRP15311 586 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 ABATP80404 500 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 RELAQ04206 551 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 MRPL49Q13405 166 aaKnown RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 TSTA3Q13630 321 aaPredicted RBP14.07□□□□□ -0.16
CBX3-203ENST00000409747 CYP1B1Q16678 543 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 LONRF1Q17RB8 773 aa14.07□□□□□ -0.16
CBX3-203ENST00000409747 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms