RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 UGT1A4P22310 534 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 HNF4AP41235 474 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 HUNKP57058 714 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 LMO4P61968 165 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 RALBP1Q15311 655 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 WDR78Q5VTH9 848 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 LYSMD4Q5XG99 296 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 KRT39Q6A163 491 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 FAM198BQ6UWH4 519 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 DET1Q7L5Y6 550 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 LYG1Q8N1E2 194 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 KLHDC1Q8N7A1 406 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 POMGNT2Q8NAT1 580 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 POGLUT1Q8NBL1 392 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 SLC37A3Q8NCC5 494 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 APOBEC4Q8WW27 367 aaKnown RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 FAM71F1Q96KD3 344 aaPredicted RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 PIGQQ9BRB3 760 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 ZMYND12Q9H0C1 365 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 TLE6Q9H808 572 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 NUDT4Q9NZJ9 180 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 MAN1B1Q9UKM7 699 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 TCRBV21S2A2A0A5A6 115 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 TRBC2A0A5B9 178 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 PSMD10O75832 226 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 NR2F1P10589 423 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 PRKAR1AP10644 381 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 PRKACGP22612 351 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 AZGP1P25311 298 aaKnown RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 LHX1P48742 406 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 DNA2P51530 1060 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 CSE1LP55060 971 aaKnown RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 BECN1Q14457 450 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 ZNF74Q16587 644 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 VWC2Q2TAL6 325 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 SNAI3Q3KNW1 292 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 TAF1BQ53T94 588 aaPredicted RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 IQCHQ86VS3 1027 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 NDUFAF2Q8N183 169 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 GATAD1Q8WUU5 269 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 C4orf45Q96LM5 186 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 NYXQ9GZU5 481 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 PIH1D3Q9NQM4 214 aaKnown RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 TEX10Q9NXF1 929 aaPredicted RBP3.49□□□□□ -1.85
PMS1-203ENST00000409593 MORF4L1Q9UBU8 362 aa3.49□□□□□ -1.85
PMS1-203ENST00000409593 MEX3AA1L020 520 aaKnown RBP3.48□□□□□ -1.85
PMS1-203ENST00000409593 SNURFLB1AK76 121 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 TADA2AO75478 443 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 IGHEP01854 428 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 CYP11B2P19099 503 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 MC5RP33032 325 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 CAPZA2P47755 286 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 DSCR10P59022 87 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 RALGDSQ12967 914 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 ITGA7Q13683 1181 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 ALCAMQ13740 583 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 C9orf152Q5JTZ5 239 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 PAQR6Q6TCH4 344 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 OMA1Q96E52 524 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 ZNF300Q96RE9 604 aaPredicted RBP3.48□□□□□ -1.85
PMS1-203ENST00000409593 CPNE1Q99829 537 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 DCTN5Q9BTE1 182 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 LRRC61Q9BV99 259 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 MTMR12Q9C0I1 747 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 GPR88Q9GZN0 384 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 WWTR1Q9GZV5 400 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 THEGQ9P2T0 379 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 CHKBQ9Y259 395 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 CSNK1G3Q9Y6M4 447 aa3.48□□□□□ -1.85
PMS1-203ENST00000409593 COL2A1P02458 1487 aaPredicted RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 PASKQ96RG2 1323 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 SPRY1O43609 319 aaPredicted RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 AKR1B1P15121 316 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 CD22P20273 847 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 CD27P26842 260 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 TSFMP43897 325 aaKnown RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 ALDH3A2P51648 485 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 CYCSP99999 105 aaKnown RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 MS4A2Q01362 244 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 MYL7Q01449 175 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 PTPRCAPQ14761 206 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 FASTKD3Q14CZ7 662 aaKnown RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 EFTUD2Q15029 972 aaKnown RBP eCLIP3.47□□□□□ -1.85
PMS1-203ENST00000409593 BRINP3Q76B58 766 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 LINC00615Q96LM1 132 aaPredicted RBP3.47□□□□□ -1.85
PMS1-203ENST00000409593 SPAG5Q96R06 1193 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 LPAR4Q99677 370 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 Q9H8V8 135 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 CDH20Q9HBT6 801 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 PCNX3Q9H6A9 2034 aa3.47□□□□□ -1.85
PMS1-203ENST00000409593 PI15O43692 258 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 C22orf31O95567 290 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 VTNP04004 478 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 ATP5BP06576 529 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 ACADSP16219 412 aa3.46□□□□□ -1.85
PMS1-203ENST00000409593 RPL35AP18077 110 aaKnown RBP3.46□□□□□ -1.85
PMS1-203ENST00000409593 ASCL1P50553 236 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms