RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 CHST8Q9H2A9 424 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 WASH6PQ9NQA3 447 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 FGF21Q9NSA1 209 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 STK38LQ9Y2H1 464 aa12.32□□□□□ -0.44
CHRNA1-205ENST00000409542 FAM237BA0A1B0GVD1 139 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 USP1O94782 785 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 CDK14O94921 469 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ALDOAP04075 364 aaKnown RBP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 MYL2P10916 166 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 IDSP22304 550 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 CD68P34810 354 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 DCDC1P59894 354 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 STX3Q13277 289 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 NR6A1Q15406 480 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF517Q6ZMY9 492 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 CRLF3Q8IUI8 442 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 OR52K1Q8NGK4 314 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 AGAP11Q8TF27 550 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 FATE1Q969F0 183 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 NSL1Q96IY1 281 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF514Q96K75 400 aaPredicted RBP12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 TEKT5Q96M29 485 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 RANBP9Q96S59 729 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ZSCAN5AQ9BUG6 496 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 MECRQ9BV79 373 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 WWP1Q9H0M0 922 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 SLAMF7Q9NQ25 335 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 EMCNQ9ULC0 261 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 PSMD13Q9UNM6 376 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF451Q9Y4E5 1061 aa12.31□□□□□ -0.44
CHRNA1-205ENST00000409542 A8MUI8 341 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 FCHO1O14526 889 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 PLIN3O60664 434 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CCDC22O60826 627 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 SCRG1O75711 98 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CAPN1P07384 714 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CALB2P22676 271 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 SERPINB3P29508 390 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ACY1Q03154 408 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 TMEM115Q12893 351 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 RAPSNQ13702 412 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 PRPSAP1Q14558 356 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 RPE65Q16518 533 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 PLEKHN1Q494U1 663 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ATP13A5Q4VNC0 1218 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CES4AQ5XG92 561 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 D2HGDHQ8N465 521 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ZBTB2Q8N680 514 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ENDOVQ8N8Q3 282 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF669Q96BR6 464 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 SNRNP40Q96DI7 357 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 IL22Q9GZX6 179 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ARL8BQ9NVJ2 186 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ASF1BQ9NVP2 202 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 TXNDC16Q9P2K2 825 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 NFKBIL1Q9UBC1 381 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ZNF711Q9Y462 761 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 PSAT1Q9Y617 370 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 CFAP20Q9Y6A4 193 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
CHRNA1-205ENST00000409542 ZCWPW2A0A1B0GU75 182 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 GPR39O43194 453 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 VEGFDO43915 354 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 DPM1O60762 260 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 CPNE3O75131 537 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 PROCP04070 461 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 NFKB1P19838 968 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 POU3F2P20265 443 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 SPRP35270 261 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 ARCN1P48444 511 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 SERPINB8P50452 374 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 CTSCP53634 463 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 CSE1LP55060 971 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 PDE1BQ01064 536 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 TBCCQ15814 346 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 ANKRD20A4Q4UJ75 823 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 FASTKD1Q53R41 847 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 TICAM1Q8IUC6 712 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 TMEM126BQ8IUX1 230 aa12.29□□□□□ -0.44
CHRNA1-205ENST00000409542 FAM13CQ8NE31 585 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms