RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SLC13A5Q86YT5 568 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 MREGQ8N565 214 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 LINC00615Q96LM1 132 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 C12orf66Q96MD2 445 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ZNF778Q96MU6 729 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 OR6C1Q96RD1 312 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 COPS8Q99627 209 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SLC12A9Q9BXP2 914 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SHCBP1LQ9BZQ2 653 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ZNF768Q9H5H4 540 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 LRRC40Q9H9A6 602 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 LZTFL1Q9NQ48 299 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 FAM114A2Q9NRY5 505 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 THAP1Q9NVV9 213 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SLC2A6Q9UGQ3 507 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 IL17BQ9UHF5 180 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 TRBV5-4A0A0C4DH59 114 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 MROH6A6NGR9 719 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SYCE1LA8MT33 242 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 NKX2-8O15522 239 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 IFNB1P01574 187 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ATP1B2P14415 290 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 FOLR1P15328 257 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ITGALP20701 1170 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ACRV1P26436 265 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SERPINB3P29508 390 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PDHA2P29803 388 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PREPP48147 710 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PRLHRP49683 370 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 NFKB2Q00653 900 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 GALNT1Q10472 559 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PLCL1Q15111 1095 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 C6orf183Q5T699 404 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 MEI1Q5TIA1 1274 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CEACAM20Q6UY09 585 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 B3GNT6Q6ZMB0 384 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PRSS42Q7Z5A4 293 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 AVL9Q8NBF6 648 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 BBOF1Q8ND07 529 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 OR13J1Q8NGT2 312 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 EME1Q96AY2 570 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CDKN2AIPNLQ96HQ2 116 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 MAP3K3Q99759 626 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 OR5K3A6NET4 321 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 H7C0S8 307 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 CNOT3O75175 753 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 EBLN1P0CF75 366 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 PRKAR1AP10644 381 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 DRD4P21917 467 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 VHLP40337 213 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 HADHAP40939 763 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 KRT6CP48668 564 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 NCALDP61601 193 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 PPP2R2AP63151 447 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 SP140Q13342 867 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 CDONQ4KMG0 1287 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 WASHC2DQ5SRD0 308 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 TAS2R42Q7RTR8 314 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 NLGN4XQ8N0W4 816 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 NLGN4YQ8NFZ3 816 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 EPS8L3Q8TE67 593 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 MED8Q96G25 268 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 WBP1Q96G27 269 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 DCUN1D1Q96GG9 259 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 ZDHHC12Q96GR4 267 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 ZNF514Q96K75 400 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 TEFMQ96QE5 360 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 CIB1Q99828 191 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 ULBP3Q9BZM4 244 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 OR52A5Q9H2C5 316 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 COG4Q9H9E3 785 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 AKIRIN1Q9H9L7 192 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 HRASLS2Q9NWW9 162 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 SLC24A2Q9UI40 661 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 TMEM184BQ9Y519 407 aaPredicted RBP9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
NIF3L1-202ENST00000409020 OR6C74A6NCV1 312 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 OR1I1O60431 355 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 GUCY1B2O75343 617 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 PAHP00439 452 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 SLC35G4P0C7Q5 338 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 ITGB6P18564 788 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 NELFEP18615 380 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 CXCR5P32302 372 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 KPNA2P52292 529 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 SEMA3AQ14563 771 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 SEL1L2Q5TEA6 688 aa9.37□□□□□ -0.91
NIF3L1-202ENST00000409020 FCRLBQ6BAA4 426 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms