RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 EEF1A1P68104 462 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 HMGN5P82970 282 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 ILF3Q12906 894 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 PLA2G7Q13093 441 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 SNAPC1Q16533 368 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 LETM2Q2VYF4 491 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 C6orf163Q5TEZ5 329 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 EEF1A1P5Q5VTE0 462 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 KCTD8Q6ZWB6 473 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 PLEKHM3Q6ZWE6 761 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 PIWIL4Q7Z3Z4 852 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 PTOV1Q86YD1 416 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF595Q8IYB9 648 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 MUC20Q8N307 709 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 POMGNT2Q8NAT1 580 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 OR2AJ1Q8NGZ0 328 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 CFAP61Q8NHU2 1237 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 SNRNP27Q8WVK2 155 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 OR6C1Q96RD1 312 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 LZTS2Q9BRK4 669 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 LRRC2Q9BYS8 371 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 TBC1D17Q9HA65 648 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 HHATLQ9HCP6 504 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 RBM28Q9NW13 759 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 OSER1Q9NX31 292 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 HAO2Q9NYQ3 351 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 WDR35Q9P2L0 1181 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 ANAPC2Q9UJX6 822 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 KIF3AQ9Y496 699 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 RPS6KL1Q9Y6S9 549 aa4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNFX1Q9P2E3 1918 aaKnown RBP4.7□□□□□ -1.66
HMGB3P19-201ENST00000403971 RBBP6Q7Z6E9 1792 aaKnown RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 DENND3A2RUS2 1198 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 MPHOSPH10O00566 681 aaKnown RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 XRCC3O43542 346 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 SPRY1O43609 319 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 SYNCRIPO60506 623 aaKnown RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 NMT2O60551 498 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 PRAMEF11O60813 436 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 TOMM70O94826 608 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 TFAP2AP05549 437 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 IFNAR1P17181 557 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 DGKAP23743 735 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 KIF5BP33176 963 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 AHRP35869 848 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 PSMC4P43686 418 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 MMP15P51511 669 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 FKBP1BP68106 108 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 SNTB1Q13884 538 aaKnown RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 C9orf152Q5JTZ5 239 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 SIRPB2Q5JXA9 342 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 GCNT6Q5T4J0 391 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF771Q7L3S4 317 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 KRT74Q7RTS7 529 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 CAMKMTQ7Z624 323 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 CCDC83Q8IWF9 413 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 NAGSQ8N159 534 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 CTCFLQ8NI51 663 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 TEKT4Q8WW24 435 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 CD101Q93033 1021 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 PGAP3Q96FM1 320 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF830Q96NB3 372 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 DPAGT1Q9H3H5 408 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 STX8Q9UNK0 236 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 STK36Q9NRP7 1315 aa4.69□□□□□ -1.66
HMGB3P19-201ENST00000403971 MYH7BA7E2Y1 1941 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 WDR81Q562E7 1941 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 A0A0B4J293 547 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 A0A0G2JNG1 304 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 URADA6NGE7 173 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CPLX1O14810 134 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 BUB3O43684 328 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 BUD23O43709 281 aaKnown RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 DIAPH2O60879 1101 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 TADA2AO75478 443 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 TGFB3P10600 412 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 PDHBP11177 359 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 EEF2P13639 858 aaKnown RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CBLP22681 906 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 FMO5P49326 533 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 KIR2DS5Q14953 304 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 KYNUQ16719 465 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CBWD6Q4V339 395 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 ASPRV1Q53RT3 343 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CBWD3Q5JTY5 395 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 NDUFAF5Q5TEU4 345 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 RUSC1-AS1Q66K80 236 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZNF852Q6ZMS4 543 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 TMEM173Q86WV6 379 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CRYBG2Q8N1P7 616 aa4.68□□□□□ -1.66
HMGB3P19-201ENST00000403971 CIARTQ8N365 385 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms