RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RXRGP48443 463 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ALDH9A1P49189 494 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 AP1S1P61966 158 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 SNRPD1P62314 119 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MOGQ16653 247 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 RUNDC3AQ59EK9 446 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 GPRC6AQ5T6X5 926 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 OR2T5Q6IEZ7 315 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 NOXRED1Q6NXP6 359 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TMPRSS11BQ86T26 416 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 DPP10Q8N608 796 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 OR13F1Q8NGS4 319 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 OR2T29Q8NH02 315 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 NELL1Q92832 810 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 HPS1Q92902 700 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 GTPBP3Q969Y2 492 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MBOAT4Q96T53 435 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF334Q9HCZ1 680 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 DNAJC11Q9NVH1 559 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MYOFQ9NZM1 2061 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 DYTNA2CJ06 578 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 MAGEB17A8MXT2 336 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 LRG1P02750 347 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ANXA4P09525 319 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 CYP2A7P20853 494 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 BDKRB1P46663 353 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 CDK5R2Q13319 367 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 AQP6Q13520 282 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TP53BP2Q13625 1128 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 GANABQ14697 944 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 FRG2Q64ET8 278 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 TMEM159Q96B96 161 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 FRG2BQ96QU4 278 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 HERC2P3Q9BVR0 1158 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 KAT8Q9H7Z6 458 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 IMPAD1Q9NX62 359 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
PPP4R1-202ENST00000400555 GREB1Q4ZG55 1949 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 KPNA3O00505 521 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 PRSS23O95084 383 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 FABP3P05413 133 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 EBLN1P0CF75 366 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 MRPL58Q14197 206 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 NEK5Q6P3R8 708 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 HMGN2P46Q86SG4 172 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 HIPK1Q86Z02 1210 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 ZNF420Q8TAQ5 688 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 PROX1Q92786 737 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 PNMA8CA0A1B0GUJ8 204 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 CLDN25C9JDP6 229 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 CCL16O15467 120 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TGFB1P01137 390 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 VLDLRP98155 873 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 DCDC5Q6ZRR9 648 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 P2RY8Q86VZ1 359 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TAGAPQ8N103 731 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 APOL4Q9BPW4 351 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 DCAF13Q9NV06 445 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 PPT2Q9UMR5 302 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 ARNTLO00327 626 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 ETV3P41162 512 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 CDH12P55289 794 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 ACOX1Q15067 660 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 TCTN1Q2MV58 587 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 CCSMST1Q4G0I0 132 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 RBM48Q5RL73 367 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 AADATQ8N5Z0 425 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 HDAC2Q92769 488 aaKnown RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 KLF16Q9BXK1 252 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 SUV39H2Q9H5I1 410 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 FAIMQ9NVQ4 179 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 PRKAB1Q9Y478 270 aa12.3□□□□□ -0.44
PPP4R1-202ENST00000400555 FUOMA2VDF0 154 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RGS5O15539 181 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ERN1O75460 977 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 ACPPP15309 386 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 CD36P16671 472 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 PLEKHG6Q3KR16 790 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TRMT11Q7Z4G4 463 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 TANKQ92844 425 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 RAB23Q9ULC3 237 aa12.29□□□□□ -0.44
PPP4R1-202ENST00000400555 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms