RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TNRC6AQ8NDV7 1962 aaKnown RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 PEX12O00623 359 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 DNALI1O14645 258 aaPredicted RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 DSCR3O14972 297 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 CTSVO60911 334 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 CEACAM4O75871 244 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 TTC4O95801 387 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 IGHEP01854 428 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 F7P08709 466 aaPredicted RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 RNF224P0DH78 156 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MPC1LP0DKB6 136 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 ENO3P13929 434 aaPredicted RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MCM3P25205 808 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 RPA3P35244 121 aaPredicted RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 GCGRP47871 477 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MPP1Q00013 466 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 CUL1Q13616 776 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 PTK6Q13882 451 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 HSP90AA5PQ58FG0 334 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MRPL14Q6P1L8 145 aaKnown RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 SUSD1Q6UWL2 747 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MRGPREQ86SM8 312 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 INPP5DQ92835 1189 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 FKBP10Q96AY3 582 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 FER1L6-AS2Q96M78 137 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 PKP4Q99569 1192 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 GPR21Q99679 349 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 SLC30A3Q99726 388 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 NAT9Q9BTE0 207 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 ACAT2Q9BWD1 397 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MRPS30Q9NP92 439 aaKnown RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 ENAMQ9NRM1 1142 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 IARS2Q9NSE4 1012 aaKnown RBP12.84□□□□□ -0.35
VCX3A-202ENST00000398729 MED16Q9Y2X0 877 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 PCM1Q15154 2024 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 CCDC88CQ9P219 2028 aa12.84□□□□□ -0.35
VCX3A-202ENST00000398729 A0A0J9YVX5 310 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 FITM1A5D6W6 292 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 A6NL46 340 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 ZBTB14O43829 449 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 VPS26AO75436 327 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 HAUS5O94927 633 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 SYF2O95926 243 aaKnown RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 ONECUT2O95948 504 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 ALBP02768 609 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 GNLYP22749 145 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 PNLIPRP1P54315 467 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 VSX2P58304 361 aaPredicted RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 GNG11P61952 73 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 TSTA3Q13630 321 aaPredicted RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 CRYMQ14894 314 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 SPANXN3Q5MJ09 141 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 WASHC2DQ5SRD0 308 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 RNF44Q7L0R7 432 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 OVCH1Q7RTY7 1134 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 FBXO15Q8NCQ5 510 aaPredicted RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 CD200R1Q8TD46 325 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 ASB11Q8WXH4 323 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 RUNDC3BQ96NL0 473 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 AARSD1Q9BTE6 412 aaKnown RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 DPH7Q9BTV6 452 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 SLC22A11Q9NSA0 550 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
VCX3A-202ENST00000398729 GPR83Q9NYM4 423 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 POLQO75417 2590 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.36
VCX3A-202ENST00000398729 HYKKA2RU49 373 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 GFYI3L273 518 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 EIF3FO00303 357 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 DPM1O60762 260 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 CNOT3O75175 753 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 SEMA7AO75326 666 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 CCNDBP1O95273 360 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 SLC16A8O95907 504 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 EIF2S1P05198 315 aaKnown RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 ITGAXP20702 1163 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 DR1Q01658 176 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 DCAF10Q5QP82 559 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 FRMPD2BQ6IN97 320 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 LRRC8EQ6NSJ5 796 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 SYDE1Q6ZW31 735 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 HPS6Q86YV9 775 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 KLHL7Q8IXQ5 586 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 CPNE9Q8IYJ1 553 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 CLEC1AQ8NC01 280 aa12.82□□□□□ -0.36
VCX3A-202ENST00000398729 C2CD4AQ8NCU7 369 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-202ENST00000398729 NACC2Q96BF6 587 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms