RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CLDN7O95471 211 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CYC1P08574 325 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LCN1P31025 176 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TIA1P31483 386 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KIR2DS3Q14952 304 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PDCD2Q16342 344 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KLHL35Q6PF15 583 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 DGCR14Q96DF8 476 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KLHL32Q96NJ5 620 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SLC28A3Q9HAS3 691 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 FAM220BPB1ANY3 271 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM127O75204 238 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LEFTY1O75610 366 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 FESP07332 822 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF23P17027 643 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CAPN3P20807 821 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 HTR1BP28222 390 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 BLKP51451 505 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ERVPABLB-1P60509 514 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM115Q12893 351 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TIGD2Q4W5G0 525 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 UBE2R2Q712K3 238 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ANKRD46Q86W74 232 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 C17orf64Q86WR6 236 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ZCCHC7Q8N3Z6 543 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SFRP1Q8N474 314 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GABARAPL1Q9H0R8 117 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 BCL2L10Q9HD36 194 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CALML5Q9NZT1 146 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SLC17A4Q9Y2C5 497 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ATG2BQ96BY7 2078 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CEP295Q9C0D2 2601 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KCNE1BA0A087WTH5 132 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LOC100653049A0A140TA62 436 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KRT34O76011 436 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SPATA31D3P0C874 917 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 LAMP2P13473 410 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ENDOUP21128 410 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ACADLP28330 430 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 NTSR1P30989 418 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GRK3P35626 688 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SPATA31D4Q6ZUB0 917 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 OTOP2Q7RTS6 562 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 C11orf74Q86VG3 221 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 APCDD1Q8J025 514 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM102Q8N9M5 508 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 OR7G3Q8NG95 312 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SLC26A7Q8TE54 656 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM74Q96NL1 305 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CAMK1GQ96NX5 476 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 BHLHE41Q9C0J9 482 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TRIM45Q9H8W5 580 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CCDC167Q9P0B6 97 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CXXC1Q9P0U4 656 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KCTD3Q9Y597 815 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ELOVL7A1L3X0 281 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 ANXA8P13928 327 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PHKG1Q16816 387 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 NXNQ6DKJ4 435 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 MED27Q6P2C8 311 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 MBOAT1Q6ZNC8 495 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GOLGA7Q7Z5G4 137 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 OR4F6Q8NGB9 312 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 CCDC124Q96CT7 223 aaKnown RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 GDF15Q99988 308 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 TBCDQ9BTW9 1192 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 PTTG2Q9NZH5 202 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 NTMQ9P121 344 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 STOX2Q9P2F5 926 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-206ENST00000397617 SATB2Q9UPW6 733 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 DGKBQ9Y6T7 804 aa5.69□□□□□ -1.5
PTPRD-206ENST00000397617 KIR2DS5A0A0G2JLQ3 304 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 A0A0G2JNG1 304 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 KIR2DS3K7RE56 304 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 AHCYL1O43865 530 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ALDOCP09972 364 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 C1GALT1C1LP0DN25 315 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 XRCC1P18887 633 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 HMGA2P52926 109 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ZXDBP98169 803 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SLC25A3Q00325 362 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 CCNIQ14094 377 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 KIR2DS5Q14953 304 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NANOGP8Q6NSW7 305 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 DLEU7Q6UYE1 221 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 SYVN1Q86TM6 617 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF566Q969W8 418 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 PELOQ9BRX2 385 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 ABCG4Q9H172 646 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NOL11Q9H8H0 719 aaKnown RBP5.68□□□□□ -1.5
PTPRD-206ENST00000397617 NANOGQ9H9S0 305 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 AASDHPPTQ9NRN7 309 aa5.68□□□□□ -1.5
PTPRD-206ENST00000397617 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms