RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 FRG2Q64ET8 278 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 NXPE4Q6UWF7 544 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 SLCO4C1Q6ZQN7 724 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 CHSY3Q70JA7 882 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 CPSF7Q8N684 471 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 TTLQ8NG68 377 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 CCL4L1Q8NHW4 92 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 ZDHHC1Q8WTX9 485 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 ERP27Q96DN0 273 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 LOXL4Q96JB6 756 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 FRG2BQ96QU4 278 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 OR4K3Q96R72 315 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 TWSG1Q9GZX9 223 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 NT5DC2Q9H857 520 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 TNFRSF12AQ9NP84 129 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 SCHIP1Q9P0W5 487 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 ZNF624Q9P2J8 865 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 TMED5Q9Y3A6 229 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 FIS1Q9Y3D6 152 aa18.39■□□□□ 0.53
TSPAN4-204ENST00000397404 KCNE1BA0A087WTH5 132 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 ANXA6P08133 673 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 CSNK1EP49674 416 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 FOXA1P55317 472 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 PRDX1Q06830 199 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 DUOXA1Q1HG43 343 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 NXNQ6DKJ4 435 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 MED27Q6P2C8 311 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 FAM46DQ8NEK8 389 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 NEIL2Q969S2 332 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 SRMSQ9H3Y6 488 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 ANKMY1Q9P2S6 941 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 RNF11Q9Y3C5 154 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 SLCO1B1Q9Y6L6 691 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 SPAG17Q6Q759 2223 aa18.38■□□□□ 0.53
TSPAN4-204ENST00000397404 MANBAO00462 879 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 FCHO1O14526 889 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 UBDO15205 165 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 PIAS2O75928 621 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 RSL1D1O76021 490 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 PRR35P0CG20 571 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 IDO1P14902 403 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 PRDX6P30041 224 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 GRK3P35626 688 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 PIK3CBP42338 1070 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 CCR8P51685 355 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 DOC2AQ14183 400 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 IMPG1Q17R60 797 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 VWA5B1Q5TIE3 1220 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 OGFOD3Q6PK18 319 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 MYLK4Q86YV6 388 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 LAS2Q8IYD9 372 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 ZNF548Q8NEK5 533 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 SELENOMQ8WWX9 145 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 TUBGCP3Q96CW5 907 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 CDK15Q96Q40 435 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 ELF4Q99607 663 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 AIF1LQ9BQI0 150 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 DUSP23Q9BVJ7 150 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 NMUR2Q9GZQ4 415 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 TXLNGQ9NUQ3 528 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 ICKQ9UPZ9 632 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 TIMM22Q9Y584 194 aa18.37■□□□□ 0.53
TSPAN4-204ENST00000397404 TTC28Q96AY4 2481 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 A0A1B0GTL3 188 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 E7EQ34 232 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 FOXE1O00358 373 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 HRO43593 1189 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 NCF2P19878 526 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 CMPK1P30085 196 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 STX1BP61266 288 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ERVK-8P63133 956 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 SQLEQ14534 574 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 PLCL1Q15111 1095 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 MAPRE2Q15555 327 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ZRSR2Q15696 482 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 CPSF6Q16630 551 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 GALNTL6Q49A17 601 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 LACTB2Q53H82 288 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ICE2Q659A1 982 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ARMCX6Q7L4S7 300 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 TMPRSS11BQ86T26 416 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ALYREFQ86V81 257 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 C17orf82Q86X59 251 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 NAGSQ8N159 534 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 PPFIBP2Q8ND30 876 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 OR4K1Q8NGD4 311 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 LMX1AQ8TE12 382 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 CMTM5Q96DZ9 223 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 OR52B2Q96RD2 323 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 KCNA7Q96RP8 456 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 SARGQ9BW04 601 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 TCEAL2Q9H3H9 227 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 TUBB1Q9H4B7 451 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 EPB41L1Q9H4G0 881 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 WDR55Q9H6Y2 383 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 AKTIPQ9H8T0 292 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ABCF3Q9NUQ8 709 aa18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 ZNF490Q9ULM2 529 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-204ENST00000397404 FANCMQ8IYD8 2048 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms