RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GALNT16Q8N428 558 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 TTC29Q8NA56 475 aaPredicted RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 Q8NA96 180 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 CPT1CQ8TCG5 803 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 SMPDL3AQ92484 453 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 GPR21Q99679 349 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 SMAD5Q99717 465 aaKnown RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 MESP1Q9BRJ9 268 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 DDX47Q9H0S4 455 aaKnown RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 SOX17Q9H6I2 414 aaPredicted RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 ENAMQ9NRM1 1142 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 IARS2Q9NSE4 1012 aaKnown RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 ABCF3Q9NUQ8 709 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 CTSFQ9UBX1 484 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 FBXO5Q9UKT4 447 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 FAM169AQ9Y6X4 670 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 OR2A25A4D2G3 310 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 USP27XA6NNY8 438 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 ZSCAN12O43309 604 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 SRPX2O60687 465 aaPredicted RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 SLC16A8O95907 504 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 SYF2O95926 243 aaKnown RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 CMPK1P30085 196 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 RPA3P35244 121 aaPredicted RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 UQCRFS1P47985 274 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 PNLIPRP1P54315 467 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 UBAP2LQ14157 1087 aaKnown RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 PPP1R7Q15435 360 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 YOD1Q5VVQ6 348 aaPredicted RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 RNF44Q7L0R7 432 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 IGDCC3Q8IVU1 814 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 GRK7Q8WTQ7 553 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 ZNF480Q8WV37 535 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 ASB11Q8WXH4 323 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 INPP5DQ92835 1189 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 FER1L6-AS2Q96M78 137 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 IP6K3Q96PC2 410 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 SPSB2Q99619 263 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 ZBTB20Q9HC78 741 aaPredicted RBP17.49■□□□□ 0.39
FXN-203ENST00000396366 TAC3Q9UHF0 121 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 CDC23Q9UJX2 597 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 DHRS7Q9Y394 339 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 PCDHGB7Q9Y5F8 929 aa17.49■□□□□ 0.39
FXN-203ENST00000396366 HEATR5BQ9P2D3 2071 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CLEC18AA5D8T8 446 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 H0YGG7 62 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 SOCS6O14544 535 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 DPM1O60762 260 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CATP04040 527 aaKnown RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 ERVK-10P10266 1014 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 ARF3P61204 181 aaPredicted RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 TIAL1Q01085 375 aaKnown RBP eCLIP17.48■□□□□ 0.39
FXN-203ENST00000396366 DHX9Q08211 1270 aaKnown RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 FAM214AQ32MH5 1076 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 PLEKHN1Q494U1 663 aaPredicted RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 SLC6A19Q695T7 634 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CLEC18BQ6UXF7 455 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 PIWIL4Q7Z3Z4 852 aaKnown RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 KCNMB4Q86W47 210 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 ATCAYQ86WG3 371 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CPNE9Q8IYJ1 553 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CLEC1AQ8NC01 280 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.48■□□□□ 0.39
FXN-203ENST00000396366 CLEC18CQ8NCF0 446 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CD200R1Q8TD46 325 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 KCNJ9Q92806 393 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 FKBP10Q96AY3 582 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 PWWP2AQ96N64 755 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 NDNQ99608 321 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 ZFYVE21Q9BQ24 234 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 SLC26A1Q9H2B4 701 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 CCDC68Q9H2F9 335 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 ZNF552Q9H707 407 aaPredicted RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 WDR54Q9H977 334 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 MRPS30Q9NP92 439 aaKnown RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 FAM114A2Q9NRY5 505 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 G3BP2Q9UN86 482 aaKnown RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 MAP4K5Q9Y4K4 846 aa17.48■□□□□ 0.39
FXN-203ENST00000396366 USP9XQ93008 2570 aaPredicted RBP17.48■□□□□ 0.39
FXN-203ENST00000396366 SHANK1Q9Y566 2161 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 GOLGA6L10A0A0M3HER8 536 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 E7ENX8 843 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 GFYI3L273 518 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 AGPSO00116 658 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 ALBP02768 609 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 PIM1P11309 404 aaPredicted RBP17.47■□□□□ 0.39
FXN-203ENST00000396366 GNLYP22749 145 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 MMP11P24347 488 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 GABRB3P28472 473 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 TAP2Q03519 686 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 PRDX1Q06830 199 aaKnown RBP17.47■□□□□ 0.39
FXN-203ENST00000396366 TTLL9Q3SXZ7 439 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 HP1BP3Q5SSJ5 553 aaPredicted RBP17.47■□□□□ 0.39
FXN-203ENST00000396366 ICE2Q659A1 982 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 NEK10Q6ZWH5 1172 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 PAQR7Q86WK9 346 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 LRRC56Q8IYG6 542 aaPredicted RBP17.47■□□□□ 0.39
FXN-203ENST00000396366 PRSS58Q8IYP2 241 aa17.47■□□□□ 0.39
FXN-203ENST00000396366 COL26A1Q96A83 441 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms