RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ABATP80404 500 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 TUBB3Q13509 450 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 NAA25Q14CX7 972 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 GPR19Q15760 415 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 TSNAXIP1Q2TAA8 658 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 DCAF12Q5T6F0 453 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 FCRL6Q6DN72 434 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 SULT1C3Q6IMI6 304 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 CEACAM20Q6UY09 585 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 CDHR3Q6ZTQ4 885 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 CLEC14AQ86T13 490 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 TCAIMQ8N3R3 496 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 RIBC1Q8N443 379 aaPredicted RBP18.47■□□□□ 0.55
HOXA9-202ENST00000396345 MDM1Q8TC05 714 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 ATOH8Q96SQ7 321 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 DDA1Q9BW61 102 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 ASPSCR1Q9BZE9 553 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 CHRNA10Q9GZZ6 450 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 CCDC86Q9H6F5 360 aaKnown RBP18.47■□□□□ 0.55
HOXA9-202ENST00000396345 APMAPQ9HDC9 416 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 FAM60AQ9NP50 221 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 ASCL3Q9NQ33 180 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 THSD1Q9NS62 852 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 FGF21Q9NSA1 209 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 ZNF358Q9NW07 568 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 NUDT4Q9NZJ9 180 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 KLK4Q9Y5K2 254 aa18.47■□□□□ 0.55
HOXA9-202ENST00000396345 A0A1W2PPM1 405 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 SYCE1LA8MT33 242 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 CDRT15L2A8MXV6 281 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 C1QTNF9BB2RNN3 333 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 SUPT3HB4E1H0 165 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 TARM1B6A8C7 271 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 GOLGA8RI6L899 631 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 NVLO15381 856 aaKnown RBP18.46■□□□□ 0.55
HOXA9-202ENST00000396345 CTIFO43310 598 aaKnown RBP18.46■□□□□ 0.55
HOXA9-202ENST00000396345 SUPT3HO75486 399 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 RBP1P09455 135 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 C1QTNF9P0C862 333 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PYGBP11216 843 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 ERVPABLB-1P60509 514 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 IL11RAQ14626 422 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PTCHD3Q3KNS1 767 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 LCTLQ6UWM7 567 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 UNQ6494/PRO21346Q6UXR6 183 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PDPRQ8NCN5 879 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PMEPA1Q969W9 287 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 SCYL1Q96KG9 808 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 ZNF578Q96N58 590 aaPredicted RBP18.46■□□□□ 0.55
HOXA9-202ENST00000396345 TEFMQ96QE5 360 aaKnown RBP18.46■□□□□ 0.55
HOXA9-202ENST00000396345 DPH7Q9BTV6 452 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 TMEM109Q9BVC6 243 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 B3GNT4Q9C0J1 378 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 FANCEQ9HB96 536 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 SLC6A20Q9NP91 592 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 WWOXQ9NZC7 414 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 RARRES3Q9UL19 164 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PCDHGA7Q9Y5G6 932 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 PCDHGA3Q9Y5H0 932 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 B3GALT1Q9Y5Z6 326 aa18.46■□□□□ 0.55
HOXA9-202ENST00000396345 FOXO6A8MYZ6 492 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 C9orf172C9J069 976 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 UBXN8O00124 270 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 TAPBPO15533 448 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 MSL3P1P0C860 447 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 FGF5P12034 268 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 NPPBP16860 134 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 SLC5A2P31639 672 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 C18orf21Q32NC0 220 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-202ENST00000396345 TBC1D25Q3MII6 688 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 TECRLQ5HYJ1 363 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 THOC6Q86W42 341 aaKnown RBP18.45■□□□□ 0.54
HOXA9-202ENST00000396345 BPHLQ86WA6 291 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-202ENST00000396345 C17orf64Q86WR6 236 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 DNAJC22Q8N4W6 341 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 N4BP2L2Q92802 583 aaPredicted RBP18.45■□□□□ 0.54
HOXA9-202ENST00000396345 ZPBPQ9BS86 351 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 HAUS8Q9BT25 410 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 ANKMY1Q9P2S6 941 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 DKK4Q9UBT3 224 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 PTBP2Q9UKA9 531 aaKnown RBP18.45■□□□□ 0.54
HOXA9-202ENST00000396345 SNX7Q9UNH6 387 aa18.45■□□□□ 0.54
HOXA9-202ENST00000396345 IGKV1-8A0A0C4DH67 115 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM150CB9EJG8 249 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 IPO13O94829 963 aaKnown RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 GGT5P36269 586 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 SLC6A12P48065 614 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 DEFB110Q30KQ9 67 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 BEND6Q5SZJ8 279 aaPredicted RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 LCA5Q86VQ0 697 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 PPP1R3BQ86XI6 285 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 OR8K5Q8NH50 307 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 HNRNPLLQ8WVV9 542 aaKnown RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 ZNF501Q96CX3 271 aaPredicted RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 OR4K3Q96R72 315 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 MRPL57Q9BQC6 102 aaKnown RBP18.44■□□□□ 0.54
HOXA9-202ENST00000396345 PLCD4Q9BRC7 762 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 TMEM79Q9BSE2 394 aa18.44■□□□□ 0.54
HOXA9-202ENST00000396345 CNOT10Q9H9A5 744 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms