RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PIK3C3Q8NEB9 887 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ANGPTL6Q8NI99 470 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SUN5Q8TC36 379 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZFP90Q8TF47 636 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SUSD6Q92537 303 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 MAGED4Q96JG8 741 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GABRG3Q99928 467 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SARGQ9BW04 601 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TRIT1Q9H3H1 467 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 GKN1Q9NS71 199 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 THAP10Q9P2Z0 257 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF639Q9UID6 485 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 WBP11Q9Y2W2 641 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 TESMINQ9Y4I5 508 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SYNJ2BP-COX16A0A087WUM0 186 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 EDDM13A0A1B0GTR0 161 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SAC3D1A6NKF1 404 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 HIDE1A8MVS5 230 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 H0Y626 953 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 H0YAE9 185 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 NEMP1O14524 444 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 UBFD1O14562 309 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 ANKRD28O15084 1053 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 DYRK3O43781 588 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 NFATC1O95644 943 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CLIC3O95833 236 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CYP17A1P05093 508 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 HSD17B1P14061 328 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PRKCAP17252 672 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GPX3P22352 226 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 DGKAP23743 735 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 HNF1BP35680 557 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 RHOAP61586 193 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 LRRC74AQ0VAA2 488 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CAMK2GQ13555 558 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 OR4D1Q15615 310 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CTF1Q16619 201 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CCDC58Q4VC31 144 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF789Q5FWF6 425 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TMEM215Q68D42 235 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TXNDC8Q6A555 127 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 DHFR2Q86XF0 187 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ARMC8Q8IUR7 673 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TNS4Q8IZW8 715 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 BPIFB6Q8NFQ5 453 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 AGR3Q8TD06 166 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 KCTD4Q8WVF5 259 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SMARCD2Q92925 531 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PPWD1Q96BP3 646 aaKnown RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZNF514Q96K75 400 aaPredicted RBP5.22□□□□□ -1.57
VPS41-203ENST00000395969 CCDC115Q96NT0 180 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 FERD3LQ96RJ6 166 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CITED4Q96RK1 184 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 BCL7BQ9BQE9 202 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 C17orf80Q9BSJ5 609 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 CEP41Q9BYV8 373 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 OR2B2Q9GZK3 357 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZFYVE1Q9HBF4 777 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 NEK6Q9HC98 313 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 GPR27Q9NS67 375 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PKD2L2Q9NZM6 624 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 COX16Q9P0S2 106 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 ZDHHC2Q9UIJ5 367 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TMPRSS11EQ9UL52 423 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 SLC39A10Q9ULF5 831 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 PKP3Q9Y446 797 aa5.22□□□□□ -1.57
VPS41-203ENST00000395969 TICRRQ7Z2Z1 1910 aa5.21□□□□□ -1.57
VPS41-203ENST00000395969 SLC5A10A0PJK1 596 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 AQP12BA6NM10 295 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 UPK3BL1B0FP48 263 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 UPK3BL2E5RIL1 263 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 H3BUI4 141 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 AURKAO14965 403 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 PHGDHO43175 533 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 SYNCRIPO60506 623 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 TMEM127O75204 238 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 DNAJB5O75953 348 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 MOCS2O96007 188 aaPredicted RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 SOD1P00441 154 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 JUNP05412 331 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 EBLN1P0CF75 366 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 BMP4P12644 408 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 TPH1P17752 444 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ATP6V1B2P21281 511 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 KCNA5P22460 613 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 EEF1DP29692 281 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 SERPINB1P30740 379 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 GMPRP36959 345 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 B4GALNT1Q00973 533 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 C19orf57Q0VDD7 668 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 STX5Q13190 355 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CTBP1Q13363 440 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ADAM15Q13444 863 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CDH18Q13634 790 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 SAMD4BQ5PRF9 694 aaKnown RBP5.21□□□□□ -1.58
VPS41-203ENST00000395969 BROXQ5VW32 411 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 REP15Q6BDI9 236 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 ANKRD54Q6NXT1 300 aa5.21□□□□□ -1.58
VPS41-203ENST00000395969 CYP2R1Q6VVX0 501 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms