RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 C19orf60Q96EN9 201 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 IL17FQ96PD4 163 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 NUF2Q9BZD4 464 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 MEAF6Q9HAF1 191 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 ICKQ9UPZ9 632 aa13.23□□□□□ -0.29
VAPB-202ENST00000395802 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 SDK1Q7Z5N4 2213 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 GOLGA8QA0A0J9YX86 632 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 GOLGA8OA6NCC3 632 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 GOLGA8NF8WBI6 632 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 CCDC22O60826 627 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 UBOX5O94941 541 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 EPN2O95208 641 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 EPHA8P29322 1005 aaPredicted RBP13.22□□□□□ -0.29
VAPB-202ENST00000395802 PRDX3P30048 256 aaKnown RBP13.22□□□□□ -0.29
VAPB-202ENST00000395802 GRK3P35626 688 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 CCT8P50990 548 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 PRDX1Q06830 199 aaKnown RBP13.22□□□□□ -0.29
VAPB-202ENST00000395802 E2F2Q14209 437 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 HLA-BQ31612 363 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 GRHL2Q6ISB3 625 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 DDIASQ8IXT1 998 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 KRT78Q8N1N4 520 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 TBC1D19Q8N5T2 526 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 ARL10Q8N8L6 244 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 OR6C4Q8NGE1 309 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 CEP70Q8NHQ1 597 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 NEIL2Q969S2 332 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 ERP27Q96DN0 273 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 CCDC28BQ9BUN5 200 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 IRF2BPLQ9H1B7 796 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 MYLK2Q9H1R3 596 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 TCF7L2Q9NQB0 619 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 ZNF225Q9UK10 706 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 SLC12A4Q9UP95 1085 aa13.22□□□□□ -0.29
VAPB-202ENST00000395802 TNRC6BQ9UPQ9 1833 aaKnown RBP13.22□□□□□ -0.29
VAPB-202ENST00000395802 PIPSLA2A3N6 862 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 ANKRD65E5RJM6 399 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 E7EQ34 232 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 H0YIV9 168 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 SDC3O75056 442 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 SKAP2O75563 359 aaPredicted RBP13.21□□□□□ -0.29
VAPB-202ENST00000395802 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 EPORP19235 508 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 SERPINB3P29508 390 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 CMPK1P30085 196 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 IDH3AP50213 366 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 CCR8P51685 355 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 PHEXP78562 749 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
VAPB-202ENST00000395802 DEFB133Q30KQ1 61 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 UGT3A2Q3SY77 523 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 C14orf28Q4W4Y0 310 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 ARMC6Q6NXE6 501 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 NXPE4Q6UWF7 544 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 TMPRSS11BQ86T26 416 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 OOSP2Q86WS3 158 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 C17orf82Q86X59 251 aaPredicted RBP13.21□□□□□ -0.29
VAPB-202ENST00000395802 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 LINC01555Q8NAE3 123 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 SLC38A3Q99624 504 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 EBF4Q9BQW3 602 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 EPB41L1Q9H4G0 881 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 GAREM1Q9H706 876 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 PELI2Q9HAT8 420 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 C11orf16Q9NQ32 467 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 RNF11Q9Y3C5 154 aa13.21□□□□□ -0.29
VAPB-202ENST00000395802 ARHGEF17Q96PE2 2063 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 C2orf74A8MZ97 194 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 SLC28A1O00337 649 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 RGS14O43566 566 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 CHRM5P08912 532 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 SERPINB1P30740 379 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 FOXA1P55317 472 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 IRX1P78414 480 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 BTKQ06187 659 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 DOC2AQ14183 400 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 SF1Q15637 639 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 SPDYAQ5MJ70 313 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 ICE2Q659A1 982 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 LAIR1Q6GTX8 287 aa13.2□□□□□ -0.3
VAPB-202ENST00000395802 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
VAPB-202ENST00000395802 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms