RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TCP11X1B4DZS4 312 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 H3BMM5 538 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 MYO1CO00159 1063 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 ALBP02768 609 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 MAGEA3P43357 314 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 CLCN7P51798 805 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 MRPL49Q13405 166 aaKnown RBP17.23■□□□□ 0.35
CXCL12-204ENST00000395793 DHX34Q14147 1143 aaKnown RBP17.23■□□□□ 0.35
CXCL12-204ENST00000395793 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 YOD1Q5VVQ6 348 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-204ENST00000395793 ZNF470Q6ECI4 717 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 CASC4Q6P4E1 433 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 ZNF549Q6P9A3 640 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 KIRREL2Q6UWL6 708 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 RAB42Q8N4Z0 105 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 MAGOHBQ96A72 148 aaKnown RBP17.23■□□□□ 0.35
CXCL12-204ENST00000395793 C10orf90Q96M02 699 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 SERPINB12Q96P63 405 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 PKP4Q99569 1192 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 DPH7Q9BTV6 452 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 FBXO6Q9NRD1 293 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-204ENST00000395793 CSAG2Q9Y5P2 127 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 FAM169AQ9Y6X4 670 aa17.23■□□□□ 0.35
CXCL12-204ENST00000395793 HYKKA2RU49 373 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 VSTM2BA6NLU5 285 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 SRPX2O60687 465 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 SEMA7AO75326 666 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 USP1O94782 785 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 IGHEP01854 428 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 MLNP12872 115 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 GP1BBP13224 206 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 COILP38432 576 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 SARNPP82979 210 aaKnown RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 CTBP1Q13363 440 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 CUL1Q13616 776 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 FBXO42Q6P3S6 717 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 IGFL3Q6UXB1 125 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 REXO1L1PQ8IX06 675 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 PPFIBP2Q8ND30 876 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 MCUQ8NE86 351 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 MAGEC3Q8TD91 643 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 SNRNP40Q96DI7 357 aaKnown RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 ATP13A2Q9NQ11 1180 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 INTS10Q9NVR2 710 aaKnown RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 ZC3H7BQ9UGR2 993 aaKnown RBP17.22■□□□□ 0.35
CXCL12-204ENST00000395793 CDC23Q9UJX2 597 aa17.22■□□□□ 0.35
CXCL12-204ENST00000395793 E5RI56 91 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 KIF5CO60282 957 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 PIM1P11309 404 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-204ENST00000395793 PAMP19021 973 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 CMPK1P30085 196 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 SLC1A2P43004 574 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 PRTGQ2VWP7 1150 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 CRB2Q5IJ48 1285 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 ARMC3Q5W041 872 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 CCDC137Q6PK04 289 aaKnown RBP17.21■□□□□ 0.35
CXCL12-204ENST00000395793 PAQR7Q86WK9 346 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 NAT8LQ8N9F0 302 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 COG1Q8WTW3 980 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 ZFYVE21Q9BQ24 234 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 PLCD4Q9BRC7 762 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 XAB2Q9HCS7 855 aaKnown RBP17.21■□□□□ 0.35
CXCL12-204ENST00000395793 ASF1BQ9NVP2 202 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 SAMD15Q9P1V8 674 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 TAC3Q9UHF0 121 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 B3GNT3Q9Y2A9 372 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 NTNG1Q9Y2I2 539 aa17.21■□□□□ 0.35
CXCL12-204ENST00000395793 CTAGE9A4FU28 777 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 SDR42E2A6NKP2 422 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 H0YGG7 62 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 PFDN6O15212 129 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 ITGA3P26006 1051 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 PNLIPRP1P54315 467 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 ARF3P61204 181 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 SNRPNP63162 240 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 MPP1Q00013 466 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 Q0VFX4 171 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 AIMP2Q13155 320 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 FAM214AQ32MH5 1076 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 FHL5Q5TD97 284 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 PRAMEF13Q5VWM6 474 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 HIST2H2BCQ6DN03 193 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 ZNF425Q6IV72 752 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 NEK10Q6ZWH5 1172 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 CUZD1Q86UP6 607 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 LRRC56Q8IYG6 542 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 PRSS58Q8IYP2 241 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 STT3BQ8TCJ2 826 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 ZNF480Q8WV37 535 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 SMPDL3AQ92484 453 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 NACC2Q96BF6 587 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 PBKQ96KB5 322 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 SIGLEC10Q96LC7 697 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 ZNF304Q9HCX3 659 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 MRPS30Q9NP92 439 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 MAP10Q9P2G4 905 aa17.2■□□□□ 0.34
CXCL12-204ENST00000395793 NXT1Q9UKK6 140 aaKnown RBP17.2■□□□□ 0.34
CXCL12-204ENST00000395793 JRKLQ9Y4A0 524 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms