RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 PKP4Q99569 1192 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 PAIP2Q9BPZ3 127 aaKnown RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 TMEM79Q9BSE2 394 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TRIM54Q9BYV2 358 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SLC6A16Q9GZN6 736 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 WWP1Q9H0M0 922 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 ZBTB26Q9HCK0 441 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 THSD1Q9NS62 852 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SCHIP1Q9P0W5 487 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 ZNF624Q9P2J8 865 aaPredicted RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 PCDHGA8Q9Y5G5 932 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 TNPO3Q9Y5L0 923 aaKnown RBP8.2□□□□□ -1.1
HERC4-203ENST00000395185 COLEC10Q9Y6Z7 277 aa8.2□□□□□ -1.1
HERC4-203ENST00000395185 SPTBN4Q9H254 2564 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 A0A1W2PQM1 296 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 LRRC14BA6NHZ5 514 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 D6RAR5 112 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 E7ENX8 843 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PPP6CO00743 305 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PLD2O14939 933 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 DUX1O43812 170 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PRICKLE3O43900 615 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 TNFSF15O95150 251 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SIX3O95343 332 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 ANXA5P08758 320 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 MTHFD1P11586 935 aaKnown RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 ALOX15P16050 662 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 EPORP19235 508 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 RPL10P27635 214 aaKnown RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 CD1CP29017 333 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PBLDP30039 288 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 CCKBRP32239 447 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CSTF2P33240 577 aaKnown RBP eCLIP8.19□□□□□ -1.13e-7■■■■□ 20.1
HERC4-203ENST00000395185 HSD17B2P37059 387 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SLC19A1P41440 591 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SLC1A6P48664 564 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 AGTR2P50052 363 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 EPHA4P54764 986 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ERVPABLB-1P60509 514 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 UBE2IP63279 158 aaKnown RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 CBX1P83916 185 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 TAP2Q03519 686 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 TRA2AQ13595 282 aaKnown RBP eCLIP8.19□□□□□ -1.1
HERC4-203ENST00000395185 RCN2Q14257 317 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 NR1D2Q14995 579 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 UGT3A2Q3SY77 523 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SYTL3Q4VX76 610 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ANKS6Q68DC2 871 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CGB2Q6NT52 195 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 TMEM71Q6P5X7 295 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ZCCHC23Q6ZST2 131 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 FRMD7Q6ZUT3 714 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PROSER1Q86XN7 944 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PLXDC1Q8IUK5 500 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 DCUN1D3Q8IWE4 304 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CCDC63Q8NA47 563 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 OR4D9Q8NGE8 314 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 OR9A1PQ8NGU1 263 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 LRRC8CQ8TDW0 803 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ZNF480Q8WV37 535 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 STON2Q8WXE9 905 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 NCSTNQ92542 709 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 RAD51AP1Q96B01 352 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PHF21BQ96EK2 531 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 LIN37Q96GY3 246 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 FOPNLQ96NB1 174 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SLC46A1Q96NT5 459 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CCT8L2Q96SF2 557 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SGPP1Q9BX95 441 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PITPNM3Q9BZ71 974 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CD244Q9BZW8 370 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 UCK1Q9HA47 277 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 CD274Q9NZQ7 290 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 STOX2Q9P2F5 926 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 ZNF225Q9UK10 706 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 PCTPQ9UKL6 214 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 SATB2Q9UPW6 733 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ENTPD2Q9Y5L3 495 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 HEBP2Q9Y5Z4 205 aa8.19□□□□□ -1.1
HERC4-203ENST00000395185 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
HERC4-203ENST00000395185 IGHV1OR21-1A0A087WYE8 117 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 SUPT3HB4E1H0 165 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 IFRD1O00458 451 aaPredicted RBP8.18□□□□□ -1.1
HERC4-203ENST00000395185 HGSO14964 777 aaPredicted RBP8.18□□□□□ -1.1
HERC4-203ENST00000395185 BRINP1O60477 761 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 PRAMEF4O60810 478 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 SUPT3HO75486 399 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 STK16O75716 305 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 DXOO77932 396 aaKnown RBP8.18□□□□□ -1.1
HERC4-203ENST00000395185 SLC16A8O95907 504 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 FAM107AO95990 144 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 CHRNGP07510 517 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 HIST1H2AGP0C0S8 130 aaPredicted RBP8.18□□□□□ -1.1
HERC4-203ENST00000395185 SLC35G4P0C7Q5 338 aa8.18□□□□□ -1.1
HERC4-203ENST00000395185 GFAPP14136 432 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms