RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SLC38A8A6NNN8 435 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TNFRSF11BO00300 401 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PLOD3O60568 738 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CLDN7O95471 211 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 GADD45AP24522 165 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 RRM2P31350 389 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 OR2B6P58173 313 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 IL18R1Q13478 541 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PHKG1Q16816 387 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 FAM131AQ6UXB0 335 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PTCHD4Q6ZW05 846 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CLECL1Q8IZS7 167 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ENKURQ8TC29 256 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 NEURL2Q9BR09 285 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 SPATA7Q9P0W8 599 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF221Q9UK13 617 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TNPO3Q9Y5L0 923 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF197O14709 1029 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 SSTR4P31391 388 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 SGSHP51688 502 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 NFKB2Q00653 900 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 BCL2L1Q07817 233 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CDK5R2Q13319 367 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 MANEALQ5VSG8 457 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 DESI1Q6ICB0 168 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 EIF3MQ7L2H7 374 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ANKRD13BQ86YJ7 626 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ARRDC2Q8TBH0 407 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PHF10Q8WUB8 498 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 AMBRA1Q9C0C7 1298 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 OR51E2Q9H255 320 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TP63Q9H3D4 680 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ATP13A3Q9H7F0 1226 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ALPK2Q86TB3 2170 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ACSL4O60488 711 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TRBC1P01850 177 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 MTHFD2P13995 350 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 GJA1P17302 382 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 DGKAP23743 735 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 RPP38P78345 283 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 IL10RBQ08334 325 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CHIT1Q13231 466 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TOP3AQ13472 1001 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 HKDC1Q2TB90 917 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ADPRMQ3LIE5 342 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 OR2T5Q6IEZ7 315 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 DEF8Q6ZN54 512 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 OR2T29Q8NH02 315 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
NFKB1-202ENST00000394820 UBXN10Q96LJ8 280 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ALPK1Q96QP1 1244 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 CSF3RQ99062 836 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PKP4Q99569 1192 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ZDHHC6Q9H6R6 413 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 GPRC5BQ9NZH0 403 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 TRPM5Q9NZQ8 1165 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 PCTPQ9UKL6 214 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 SNX6Q9UNH7 406 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
NFKB1-202ENST00000394820 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 SCAMP1O15126 338 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 AQP9O43315 295 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 OR10H3O60404 316 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 OAZ2O95190 189 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 MMP2P08253 660 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 HOXC8P31273 242 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 SMAD3P84022 425 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 TSTQ16762 297 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 INAVAQ3KP66 663 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 RBM48Q5RL73 367 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 Q6ZSR9 355 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 MEX3DQ86XN8 651 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 OR13F1Q8NGS4 319 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 SLC9A8Q9Y2E8 581 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ALPLP05186 524 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms