RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SLC22A2O15244 555 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DHRS4L1P0CG22 281 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GCAP28676 217 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 CD68P34810 354 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 CASP3P42574 277 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RPL35P42766 123 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 OR3A3P47888 321 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 IDH2P48735 452 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 PLA2G16P53816 162 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PDGFRLQ15198 375 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MEP1AQ16819 746 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 FAM214AQ32MH5 1076 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RFX4Q33E94 735 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DGKKQ5KSL6 1271 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 AGAP6Q5VW22 663 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GALNT5Q7Z7M9 940 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ZC3HC1Q86WB0 502 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 ARHGAP12Q8IWW6 846 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PIK3C3Q8NEB9 887 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TRPV3Q8NET8 790 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 VPS37AQ8NEZ2 397 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TP53INP1Q96A56 240 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 FCRL3Q96P31 734 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 AGAP4Q96P64 663 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TBCDQ9BTW9 1192 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MCOLN1Q9GZU1 580 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DSN1Q9H410 356 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 OSGEPL1Q9H4B0 414 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 KCTD5Q9NXV2 234 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 POLG2Q9UHN1 485 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MKLN1Q9UL63 735 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ABCG2Q9UNQ0 655 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DOCK3Q8IZD9 2030 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 OR51F1A6NGY5 319 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 C9JVG2 144 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PLK4O00444 970 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 NOBOXO60393 691 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 SERPIND1P05546 499 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 CA3P07451 260 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PRKAR1AP10644 381 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MTHFD1P11586 935 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 TSPAN8P19075 237 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MAPK1P28482 360 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 NIPAL4Q0D2K0 466 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 LMAN2Q12907 356 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 SELENBP1Q13228 472 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DDX39BQ13838 428 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 DAG1Q14118 895 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 NR6A1Q15406 480 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 VPS26BQ4G0F5 336 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 STEAP4Q687X5 459 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GLYATQ6IB77 296 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DHRS4L2Q6PKH6 230 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 DOK6Q6PKX4 331 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 CARM1Q86X55 608 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 CLYBLQ8N0X4 340 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TAGAPQ8N103 731 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 LILRA2Q8N149 483 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 FSTL5Q8N475 847 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 C12orf76Q8N812 135 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 GALNT11Q8NCW6 608 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 SHKBP1Q8TBC3 707 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TFAP2CQ92754 450 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TRNT1Q96Q11 434 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 SNX18Q96RF0 628 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GAS2L1Q99501 681 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 SLC22A4Q9H015 551 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MMP27Q9H306 513 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 KLQ9UEF7 1012 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 NUMBLQ9Y6R0 609 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GNB5O14775 395 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RFPL1O75677 317 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RPN2P04844 631 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 FGF3P11487 239 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 CD40LGP29965 261 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ERP29P30040 261 aaKnown RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 P2RX3P56373 397 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ZNF45Q02386 682 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MED22Q15528 200 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 NPTX1Q15818 432 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GPR33Q49SQ1 333 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ARSIQ5FYB1 569 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RANBP10Q6VN20 620 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 SNX20Q7Z614 316 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ZNF605Q86T29 641 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GPR65Q8IYL9 337 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PEX13Q92968 403 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 MYDGFQ969H8 173 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 TRIM43Q96BQ3 446 aaPredicted RBP5.55□□□□□ -1.52
RFFL-202ENST00000394597 AP2M1Q96CW1 435 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 RANBP9Q96S59 729 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 GPR22Q99680 433 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 UCK2Q9BZX2 261 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 SFXN1Q9H9B4 322 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 ZBTB26Q9HCK0 441 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 BRD7Q9NPI1 651 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 C14orf119Q9NWQ9 140 aa5.55□□□□□ -1.52
RFFL-202ENST00000394597 PAK1IP1Q9NWT1 392 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms