RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 OR2T11Q8NH01 316 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 SKA2Q8WVK7 121 aaPredicted RBP9.71□□□□□ -0.85
PSEN1-204ENST00000394164 PMEPA1Q969W9 287 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 TADA1Q96BN2 335 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 EID2BQ96D98 161 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 L3HYPDHQ96EM0 354 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 DEFB118Q96PH6 123 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CLPBQ9H078 707 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 RANGRFQ9HD47 186 aaPredicted RBP9.71□□□□□ -0.85
PSEN1-204ENST00000394164 AMBNQ9NP70 447 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 NECTIN3Q9NQS3 549 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 CREBZFQ9NS37 354 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 FBXL12Q9NXK8 326 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.85
PSEN1-204ENST00000394164 H7C4K7 107 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 HMGA1P17096 107 aaKnown RBP9.71□□□□□ -0.86
PSEN1-204ENST00000394164 CD6P30203 668 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 CSKP41240 450 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 ISL1P61371 349 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 LCP2Q13094 533 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 CBX2Q14781 532 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-204ENST00000394164 TAB1Q15750 504 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 NKG7Q16617 165 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 ZNF181Q2M3W8 571 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 ADGRF1Q5T601 910 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 AFTPHQ6ULP2 937 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 NRARPQ7Z6K4 114 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 BPIFB1Q8TDL5 484 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.71□□□□□ -0.86
PSEN1-204ENST00000394164 YIPF6Q96EC8 236 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 CAPNS2Q96L46 248 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 KCNS3Q9BQ31 491 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 NUAK2Q9H093 628 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 SYTL2Q9HCH5 934 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 UCKL1Q9NWZ5 548 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 EHD3Q9NZN3 535 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 ZNF639Q9UID6 485 aa9.71□□□□□ -0.86
PSEN1-204ENST00000394164 BBIP1A8MTZ0 92 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 BCKDKO14874 412 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 INPPL1O15357 1258 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 KERAO60938 352 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CLDN11O75508 207 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 WISP3O95389 354 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CD160O95971 181 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 ZDHHC11BP0C7U3 371 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 PFKLP17858 780 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 LBPP18428 481 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 S100A5P33763 92 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 HTR3AP46098 478 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 DGKQP52824 942 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 IL2P60568 153 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 TAF1AQ15573 450 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CXorf57Q6NSI4 855 aaKnown RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 AHSA2Q719I0 299 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 TCAIMQ8N3R3 496 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 GLB1L3Q8NCI6 653 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 MMP28Q9H239 520 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 NARFLQ9H6Q4 476 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 C12orf4Q9NQ89 552 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 STMN3Q9NZ72 180 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 ANKRD36A6QL64 1941 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 A0A1B0GVM2 712 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 PCP4L1A6NKN8 68 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 hCG_2039718K7EN88 272 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 GSTA4O15217 222 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 FAM20BO75063 409 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 PRSS23O95084 383 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CLDN7O95471 211 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 HSPA7P48741 367 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CYP4F2P78329 520 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CYP4F3Q08477 520 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 FAM98BQ52LJ0 330 aaKnown RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 IRAK1BP1Q5VVH5 260 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 PTRHD1Q6GMV3 140 aaKnown RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 ZNF544Q6NX49 715 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 IL27RAQ6UWB1 636 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 B3GNT8Q7Z7M8 397 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CCDC28AQ8IWP9 274 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 ST13P5Q8NFI4 369 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CLHC1Q8NHS4 586 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 METTL6Q8TCB7 284 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 PIK3R3Q92569 461 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 SNAPC3Q92966 411 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 Q96MT0 163 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 EGFL8Q99944 293 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 CIPCQ9C0C6 399 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 SLC7A5P2Q9GIP4 190 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 NSUN3Q9H649 340 aaKnown RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 KAT8Q9H7Z6 458 aaKnown RBP9.7□□□□□ -0.86
PSEN1-204ENST00000394164 FNIP2Q9P278 1114 aa9.7□□□□□ -0.86
PSEN1-204ENST00000394164 ISPDA4D126 451 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 AIREO43918 545 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 PTTG1O95997 202 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 WEE1P30291 646 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 UQCRC1P31930 480 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 STK19P49842 368 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-204ENST00000394164 SLAMF1Q13291 335 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 SLX4IPQ5VYV7 408 aa9.69□□□□□ -0.86
PSEN1-204ENST00000394164 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms