RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 DPH7Q9BTV6 452 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 ATG10Q9H0Y0 220 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 UTP6Q9NYH9 597 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 ANKMY1Q9P2S6 941 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 TLK1Q9UKI8 766 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 ACOT9Q9Y305 439 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 OARD1Q9Y530 152 aa18.26■□□□□ 0.51
PDLIM7-204ENST00000393546 SPTBP11277 2137 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 EXOC1LA0A1B0GW35 172 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 E7EQ34 232 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 KRT38O76015 456 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 NTRK1P04629 796 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 ANXA5P08758 320 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 MYBL2P10244 700 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 CD1DP15813 335 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 SLC26A3P40879 764 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 GABRA4P48169 554 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 UCNP55089 124 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 CSHL1Q14406 222 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 PPP1R3AQ16821 1122 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 DEFB110Q30KQ9 67 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 CAPN13Q6MZZ7 669 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 GALNT6Q8NCL4 622 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 ALKBH8Q96BT7 664 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 RNF31Q96EP0 1072 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 CCNL2Q96S94 520 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 UNKQ9C0B0 810 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 SLC7A5P2Q9GIP4 190 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 EURLQ9NYK6 297 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 SNX7Q9UNH6 387 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 SSUH2Q9Y2M2 353 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 PCDHB3Q9Y5E6 796 aa18.25■□□□□ 0.51
PDLIM7-204ENST00000393546 A0A087X1B8 175 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 TEX51A0A1B0GUA7 166 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 HMX2A2RU54 273 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 CPNE3O75131 537 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 OR2B3O76000 313 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 SLC35E2BP0CK96 405 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 CNTFP26441 200 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 TYK2P29597 1187 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 SERPINB8P50452 374 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 TBPL1P62380 186 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 YBX1P67809 324 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 CDKL1Q00532 357 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 ABHD18Q0P651 414 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 SLC29A2Q14542 456 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 LGSNQ5TDP6 509 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 PRAMEF13Q5VWM6 474 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 C19orf48Q6RUI8 117 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 EGFL8Q99944 293 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 CCDC77Q9BR77 488 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 PLCD4Q9BRC7 762 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 SPRTNQ9H040 489 aaPredicted RBP18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 NMRAL1Q9HBL8 299 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 SLC6A20Q9NP91 592 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 IRAK4Q9NWZ3 460 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 ZNF180Q9UJW8 692 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 PADI1Q9ULC6 663 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 AP1M2Q9Y6Q5 423 aa18.24■□□□□ 0.51
PDLIM7-204ENST00000393546 OR2A25A4D2G3 310 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 HCRTR1O43613 425 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 SRPX2O60687 465 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 C2P06681 752 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 HBQ1P09105 142 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 LTA4HP09960 611 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 HRH2P25021 359 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 HNMTP50135 292 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 TMPRSS3P57727 454 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 TAF1BQ53T94 588 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 TLDC1Q6P9B6 456 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 LCTLQ6UWM7 567 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 C17orf64Q86WR6 236 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 GPSM1Q86YR5 675 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 OR56A3Q8NH54 315 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 DCAKDQ8WVC6 231 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 KIAA1191Q96A73 305 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 CLIP3Q96DZ5 547 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 HAUS8Q9BT25 410 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 SGPP1Q9BX95 441 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 ACTR5Q9H9F9 607 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 SNX15Q9NRS6 342 aa18.23■□□□□ 0.51
PDLIM7-204ENST00000393546 A0A096LPK6 155 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 ZNF749O43361 778 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 CTSVO60911 334 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 KLK3P07288 261 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 TGFBIQ15582 683 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 FAM83EQ2M2I3 478 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 TCTE1Q5JU00 501 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 PRAMEF17Q5VTA0 474 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 FBXO42Q6P3S6 717 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 CCDC81Q6ZN84 652 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 ADCK2Q7Z695 626 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 VASH2Q86V25 355 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 PAQR7Q86WK9 346 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 STAG3L4Q8TBR4 150 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 KIAA1143Q96AT1 154 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 PYCR2Q96C36 320 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
PDLIM7-204ENST00000393546 EFHD1Q9BUP0 239 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms