RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 SLC5A11Q8WWX8 675 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 TEX37Q96LM6 180 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 HAUS8Q9BT25 410 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 EFCAB11Q9BUY7 163 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 WASH6PQ9NQA3 447 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 EIF3LQ9Y262 564 aaKnown RBP16.91■□□□□ 0.3
MBD4-202ENST00000393278 PCDHGA11Q9Y5H2 935 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 OR52A4PA6NMU1 304 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 SEC22BO75396 215 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 C1GALT1C1LP0DN25 315 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 CAPN3P20807 821 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 ZFP36L2P47974 494 aaKnown RBP16.91■□□□□ 0.3
MBD4-202ENST00000393278 RCAN2Q14206 197 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 KIAA0040Q15053 153 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 RPE65Q16518 533 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 CATSPEREQ5SY80 951 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 THEMIS2Q5TEJ8 643 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 BLOC1S3Q6QNY0 202 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 NXPE4Q6UWF7 544 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 ABRAXAS1Q6UWZ7 409 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 RD3Q7Z3Z2 195 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 GJD3Q8N144 294 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 SLC22A18ASQ8N1D0 253 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 RAB42Q8N4Z0 105 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 SMPDL3AQ92484 453 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 CMTM7Q96FZ5 175 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 SLC45A3Q96JT2 553 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 CAMK1GQ96NX5 476 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 ORAI3Q9BRQ5 295 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 DENND2DQ9H6A0 471 aaPredicted RBP16.91■□□□□ 0.3
MBD4-202ENST00000393278 SLC52A3Q9NQ40 469 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 TBC1D29Q9UFV1 150 aa16.91■□□□□ 0.3
MBD4-202ENST00000393278 PRPF19Q9UMS4 504 aaKnown RBP16.91■□□□□ 0.3
MBD4-202ENST00000393278 C9JVG2 144 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 MRASO14807 208 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 ANKRD28O15084 1053 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 RASGRP1O95267 797 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 MTHFD1P11586 935 aaKnown RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 HSD3B1P14060 373 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 HSD3B2P26439 372 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 AK4P27144 223 aaPredicted RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 WASHC2DQ5SRD0 308 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 MED27Q6P2C8 311 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 PGM2L1Q6PCE3 622 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 C2orf73Q8N5S3 287 aaPredicted RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 PROKR1Q8TCW9 393 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 NRTNQ99748 197 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 TMEM168Q9H0V1 697 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 ACTL8Q9H568 366 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 WDR41Q9HAD4 459 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 GPR27Q9NS67 375 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 SPATA6Q9NWH7 488 aaPredicted RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 TRNAU1APQ9NX07 287 aaKnown RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 SCHIP1Q9P0W5 487 aaPredicted RBP16.9■□□□□ 0.3
MBD4-202ENST00000393278 SLC7A8Q9UHI5 535 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 PCOLCE2Q9UKZ9 415 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 HEBP2Q9Y5Z4 205 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 DGKBQ9Y6T7 804 aa16.9■□□□□ 0.3
MBD4-202ENST00000393278 FAM234BA2RU67 622 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 STK25O00506 426 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 IL12AP29459 219 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 RPS9P46781 194 aaKnown RBP16.89■□□□□ 0.29
MBD4-202ENST00000393278 PXNP49023 591 aaPredicted RBP16.89■□□□□ 0.29
MBD4-202ENST00000393278 KCNK10P57789 538 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 SLBPQ14493 270 aaKnown RBP eCLIP16.89■□□□□ 0.29
MBD4-202ENST00000393278 KRT33BQ14525 404 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 VPS26BQ4G0F5 336 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 COQ5Q5HYK3 327 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 PAGE2BQ5JRK9 111 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 CACHD1Q5VU97 1274 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 HACD2Q6Y1H2 254 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 HID1Q8IV36 788 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 RNF175Q8N4F7 328 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 CCL4L1Q8NHW4 92 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 REPS1Q96D71 796 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 SPDL1Q96EA4 605 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 RAB11FIP5Q9BXF6 653 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 PCBD2Q9H0N5 130 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 RASSF4Q9H2L5 321 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 BRF2Q9HAW0 419 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 GEMIN8Q9NWZ8 242 aaKnown RBP16.89■□□□□ 0.29
MBD4-202ENST00000393278 THEGQ9P2T0 379 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 NDUFAF1Q9Y375 327 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 TMED5Q9Y3A6 229 aa16.89■□□□□ 0.29
MBD4-202ENST00000393278 A0A1W2PPV9 198 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 ATP6V1G2O95670 118 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 ACPPP15309 386 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 JAK1P23458 1154 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 PKLRP30613 574 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 ACTR1BP42025 376 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 RAB28P51157 221 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 POLR2JP52435 117 aaKnown RBP16.88■□□□□ 0.29
MBD4-202ENST00000393278 ACTR1AP61163 376 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 LAPTM5Q13571 262 aa16.88■□□□□ 0.29
MBD4-202ENST00000393278 C10orf62Q5T681 223 aaPredicted RBP16.88■□□□□ 0.29
MBD4-202ENST00000393278 BNC2Q6ZN30 1099 aaPredicted RBP16.88■□□□□ 0.29
MBD4-202ENST00000393278 RETREG3Q86VR2 466 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms