RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SMOC2Q9H3U7 446 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 TLR6Q9Y2C9 796 aa13.91□□□□□ -0.18
RTF1-201ENST00000389629 KIAA0513O60268 411 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CCNB2O95067 398 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 GADD45GO95257 159 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 IGSF6O95976 241 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CD1EP15812 388 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 GABARAPL2P60520 117 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 GALNT1Q10472 559 aaPredicted RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 SPATC1Q76KD6 591 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CHDHQ8NE62 594 aaPredicted RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 OR52B6Q8NGF0 335 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 EIF3KQ9UBQ5 218 aaKnown RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 INTS6Q9UL03 887 aaKnown RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 PCDHGA11Q9Y5H2 935 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 NHSQ6T4R5 1651 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 OR1I1O60431 355 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 DCDC1P59894 354 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 PLD1Q13393 1074 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 SUZ12Q15022 739 aaKnown RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 FAM217AQ8IXS0 508 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 SLC37A3Q8NCC5 494 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 ZSCAN5AQ9BUG6 496 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 FNDC11Q9BVV2 318 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 PCDHGB6Q9Y5F9 930 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 NFKBIEO00221 500 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CCNDBP1O95273 360 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 NPPAP01160 153 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 SERPINA4P29622 427 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 IDUAP35475 653 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 FBXO43Q4G163 708 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 AKIRIN2Q53H80 203 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 ZNF648Q5T619 568 aaPredicted RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 TPGS1Q6ZTW0 290 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 TRMT11Q7Z4G4 463 aaKnown RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 GANCQ8TET4 914 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CHIAQ9BZP6 476 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 PTTG1O95997 202 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 IFNW1P05000 195 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CLTBP09497 229 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 ANXA4P09525 319 aaPredicted RBP13.9□□□□□ -0.18
RTF1-201ENST00000389629 USP45Q70EL2 814 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 ELMOD1Q8N336 334 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 OR6Q1Q8NGQ2 317 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 RHEBL1Q8TAI7 183 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 MYO19Q96H55 970 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 MROQ9BYG7 248 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CTPS2Q9NRF8 586 aa13.9□□□□□ -0.18
RTF1-201ENST00000389629 CELF2O95319 508 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 CRYZL1O95825 349 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CKMT1AP12532 417 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 IL7P13232 177 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 SLC9A3P48764 834 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 IFI44LQ53G44 452 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 TAPT1Q6NXT6 567 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CERS6Q6ZMG9 384 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 MSANTD3Q96H12 275 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 WACQ9BTA9 647 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PLAC1Q9HBJ0 212 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 NUFIP1Q9UHK0 495 aaKnown RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 DNMT3AQ9Y6K1 912 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 CENPBD1B2RD01 187 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PGRMC2O15173 223 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 GUCY1B2O75343 617 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 OR2B3O76000 313 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 MATN4O95460 622 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 DCTP40126 519 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 MAPKAPK2P49137 400 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 ZNF157P51786 506 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 NFKB2Q00653 900 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 SEMG2Q02383 582 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PON2Q15165 354 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CYP27C1Q4G0S4 372 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CLDN19Q8N6F1 224 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 JPH3Q8WXH2 748 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 MS4A12Q9NXJ0 267 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 BAIAP2Q9UQB8 552 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 STX16O14662 325 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CLDN11O75508 207 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 STX11O75558 287 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 PRPS2P11908 318 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 ANXA8P13928 327 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 CHIT1Q13231 466 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 GTDC1Q4AE62 458 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 WDR45BQ5MNZ6 344 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 HJURPQ8NCD3 748 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 C2orf49Q9BVC5 232 aaPredicted RBP13.89□□□□□ -0.19
RTF1-201ENST00000389629 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 TMEM138Q9NPI0 162 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 GLYATL1P3A0A0U1RQE8 302 aa13.89□□□□□ -0.19
RTF1-201ENST00000389629 GSAPA4D1B5 854 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms