RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 METTL6Q8TCB7 284 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SPPL2AQ8TCT8 520 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MORC4Q8TE76 937 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CCDC107Q8WV48 283 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ITLN1Q8WWA0 313 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 KCNE4Q8WWG9 221 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ST8SIA4Q92187 359 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FAM104AQ969W3 186 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ST6GALNAC6Q969X2 333 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ELMOD3Q96FG2 381 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 THOC1Q96FV9 657 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 DACH2Q96NX9 599 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 DGAT2Q96PD7 388 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 OR2A14Q96R47 310 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 HNRNPABQ99729 332 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NCAPGQ9BPX3 1015 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 BTBD10Q9BSF8 475 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 LMF2Q9BU23 707 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SCRT1Q9BWW7 348 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PLK3Q9H4B4 646 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PAG1Q9NWQ8 432 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CLEC5AQ9NY25 188 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SPHK1Q9NYA1 384 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 GGA3Q9NZ52 723 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NLGN3Q9NZ94 848 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 RPS6KB2Q9UBS0 482 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 Q9UF83 564 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CRCT1Q9UGL9 99 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NOL12Q9UGY1 213 aaKnown RBP eCLIP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 IL17BQ9UHF5 180 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CLEC4EQ9ULY5 219 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NENFQ9UMX5 172 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ARHGAP26Q9UNA1 814 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 STUB1Q9UNE7 303 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MTMR6Q9Y217 621 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 AUP1Q9Y679 476 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SELENOKQ9Y6D0 94 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 KCNE2Q9Y6J6 123 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PIAS3Q9Y6X2 628 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PCDH11YQ9BZA8 1340 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 OTOGLQ3ZCN5 2332 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FER1L5A0AVI2 2057 aa0.34□□□□□ -2.35
SNORD28-201ENST00000384706 NACAE9PAV3 2078 aa0.34□□□□□ -2.35
SNORD28-201ENST00000384706 ARID2Q68CP9 1835 aa0.34□□□□□ -2.35
SNORD28-201ENST00000384706 KLF18A0A0U1RQI7 1052 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CCDC196A0A1B0GTZ2 297 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 A0A1W2PQ67 120 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GLTPD2A6NH11 291 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 NPIPB15A6NHN6 443 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TRAFD1O14545 582 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TNFSF11O14788 317 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SCAMP1O15126 338 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SURF4O15260 269 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 HOXC11O43248 304 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TXNL1O43396 289 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TLX2O43763 284 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SCO2O43819 266 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 HS6ST1O60243 411 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SRPX2O60687 465 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LRP3O75074 770 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ZWINTO95229 277 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ACSL3O95573 720 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 APBB3O95704 486 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 EIF2S1P05198 315 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SRPRAP08240 638 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ASNSP08243 561 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GIG44P09565 113 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ADORA3P0DMS8 318 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RARGP13631 454 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ACHEP22303 614 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PTPN3P26045 913 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ELAVL4P26378 380 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GIFP27352 417 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PTGER4P35408 488 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 OR3A2P47893 321 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 RPL34P49207 117 aaKnown RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 GSK3BP49841 420 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 CAMPP49913 170 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TUBP50607 506 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 NDST2P52849 883 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 IST1P53990 364 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 STX17P56962 302 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LINC00315P59091 139 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 VAMP2P63027 116 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SRPXP78539 464 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 MECOMQ03112 1051 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 TLE4Q04727 773 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LMOD3Q0VAK6 560 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 KIAA0141Q14154 515 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SHHQ15465 462 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 SIX1Q15475 284 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LTB4RQ15722 352 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 PCGF3Q3KNV8 242 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 ALDH1L2Q3SY69 923 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 NHLRC3Q5JS37 347 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 C10orf62Q5T681 223 aaPredicted RBP0.34□□□□□ -2.36
SNORD28-201ENST00000384706 LINC00242Q5T6M2 205 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 C11orf63Q6NUN7 778 aa0.34□□□□□ -2.36
SNORD28-201ENST00000384706 Q6P435 159 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms