RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 MMP8P22894 467 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CCR1P32246 355 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 S100A3P33764 101 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ARL3P36405 182 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CD96P40200 585 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CBX5P45973 191 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NFKB2Q00653 900 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TIGD5Q53EQ6 642 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SEZ6L2Q6UXD5 910 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DPY19L3Q6ZPD9 716 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 IL17RCQ8NAC3 791 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TBC1D20Q96BZ9 403 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RNF32Q9H0A6 362 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TPK1Q9H3S4 243 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TFB2MQ9H5Q4 396 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 POLMQ9NP87 494 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ABI3Q9P2A4 366 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF282Q9UDV7 671 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF638Q14966 1978 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TAF1LQ8IZX4 1826 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LRRN3E7EW58 273 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NFICP08651 508 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 UBA1P22314 1058 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SERPINA4P29622 427 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CDH5P33151 784 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ECI1P42126 302 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 EPHA4P54764 986 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SEMA3BQ13214 749 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ORC1Q13415 861 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SF3A2Q15428 464 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SWI5Q1ZZU3 235 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAM182AQ5T1J6 154 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 METTL11BQ5VVY1 283 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TANGO2Q6ICL3 276 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAM111BQ6SJ93 734 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 IFNEQ86WN2 208 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HPS6Q86YV9 775 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 C11orf65Q8NCR3 313 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 BRSK1Q8TDC3 778 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 C10orf90Q96M02 699 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF778Q96MU6 729 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SLCO5A1Q9H2Y9 848 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LRRN3Q9H3W5 708 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 KCNIP3Q9Y2W7 256 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ARID2Q68CP9 1835 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 A0A0D9SG52 128 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 A0A1W2PP18 115 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ELOVL7A1L3X0 281 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CDHR4A6H8M9 788 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FOXN3O00409 490 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CCRL2O00421 344 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HTRA2O43464 458 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PRAMEF2O60811 474 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FOSL2P15408 326 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MATKP42679 507 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MASP1P48740 699 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ACTA2P62736 377 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ACTG2P63267 376 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 KCNJ11Q14654 390 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CARTPTQ16568 116 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ALG11Q2TAA5 492 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OGFOD2Q6N063 350 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CATSPERGQ6ZRH7 1159 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 RFPL4BQ6ZWI9 263 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TICAM1Q8IUC6 712 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MFSD6LQ8IWD5 586 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM161BQ8NDZ6 487 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NLGN2Q8NFZ4 835 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OR14K1Q8NGZ2 314 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PIH1D2Q8WWB5 315 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 KAT5Q92993 513 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 POTEKPQ9BYX7 375 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ACOT13Q9NPJ3 140 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NUP214P35658 2090 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CAPN14A8MX76 684 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PTGES3LE9PB15 166 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 PHYHO14832 338 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 AP2A1O95782 977 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 JUNP05412 331 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GRIA4P48058 902 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 CLK3P49761 638 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM31Q5JXX7 168 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 HAGHLQ6PII5 290 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAM131AQ6UXB0 335 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 OTOP3Q7RTS5 596 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 APTXQ7Z2E3 356 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GPR135Q8IZ08 494 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 DIRAS2Q96HU8 199 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 GABARAPL1Q9H0R8 117 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAM120CQ9NX05 1096 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF224Q9NZL3 707 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 INVSQ9Y283 1065 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TRAPPC4Q9Y296 219 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 A0A1W2PRB8 838 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms