RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OR6C1Q96RD1 312 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 ZPBPQ9BS86 351 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 ACAT2Q9BWD1 397 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 ASPSCR1Q9BZE9 553 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 APMAPQ9HDC9 416 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 MRPS30Q9NP92 439 aaKnown RBP18.03■□□□□ 0.48
SSU72-203ENST00000378725 ZNF358Q9NW07 568 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 SOHLH2Q9NX45 425 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 ANKMY1Q9P2S6 941 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 PTBP2Q9UKA9 531 aaKnown RBP18.03■□□□□ 0.48
SSU72-203ENST00000378725 PLAAQ9Y263 795 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 KLHL20Q9Y2M5 609 aa18.03■□□□□ 0.48
SSU72-203ENST00000378725 IGKV1-8A0A0C4DH67 115 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 A0A1W2PPM1 405 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 POLR1CO15160 346 aaPredicted RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 TAPBPO15533 448 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 MT-ND3P03897 115 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 RBP1P09455 135 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 MTHFD2P13995 350 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 GLRBP48167 497 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 FOXM1Q08050 763 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 TSTA3Q13630 321 aaPredicted RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 TSNAXIP1Q2TAA8 658 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 PTCHD3Q3KNS1 767 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 BEND6Q5SZJ8 279 aaPredicted RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 TMEM164Q5U3C3 297 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 PRAMEF13Q5VWM6 474 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 UNQ6494/PRO21346Q6UXR6 183 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 CEACAM20Q6UY09 585 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 LCA5Q86VQ0 697 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 PMEPA1Q969W9 287 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 PYCR2Q96C36 320 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 ZNF501Q96CX3 271 aaPredicted RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 FCRL4Q96PJ5 515 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 TEFMQ96QE5 360 aaKnown RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 OR4K3Q96R72 315 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 EGFL8Q99944 293 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 CCDC86Q9H6F5 360 aaKnown RBP18.02■□□□□ 0.48
SSU72-203ENST00000378725 SLC6A20Q9NP91 592 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 THSD1Q9NS62 852 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 FGF21Q9NSA1 209 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 NUDT4Q9NZJ9 180 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 ACSL6Q9UKU0 697 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 B3GALT1Q9Y5Z6 326 aa18.02■□□□□ 0.48
SSU72-203ENST00000378725 TLDC2A0PJX2 215 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 OR2A25A4D2G3 310 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 NCF1BA6NI72 391 aaPredicted RBP18.01■□□□□ 0.47
SSU72-203ENST00000378725 SMIM23A6NLE4 172 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 SYCE1LA8MT33 242 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 NCF1CA8MVU1 366 aaPredicted RBP18.01■□□□□ 0.47
SSU72-203ENST00000378725 C1QTNF9BB2RNN3 333 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 MAP2K7O14733 419 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 C1QTNF9P0C862 333 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 NCF1P14598 390 aaPredicted RBP18.01■□□□□ 0.47
SSU72-203ENST00000378725 HRH2P25021 359 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 SLC5A2P31639 672 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 SLC6A12P48065 614 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 RELAQ04206 551 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 TUBB3Q13509 450 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 TECRLQ5HYJ1 363 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 THEMIS2Q5TEJ8 643 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 ZNF425Q6IV72 752 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 OR8K5Q8NH50 307 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 MDM1Q8TC05 714 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 CTRCQ99895 268 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 PLCD4Q9BRC7 762 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 HAUS8Q9BT25 410 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 DPH7Q9BTV6 452 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 SPRY4Q9C004 299 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 CD274Q9NZQ7 290 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 LGALS13Q9UHV8 139 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 PILRAQ9UKJ1 303 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 RARRES3Q9UL19 164 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 SNX7Q9UNH6 387 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 NCOR2Q9Y618 2525 aa18.01■□□□□ 0.47
SSU72-203ENST00000378725 HCRTR1O43613 425 aa18■□□□□ 0.47
SSU72-203ENST00000378725 KLK8O60259 260 aa18■□□□□ 0.47
SSU72-203ENST00000378725 PYGBP11216 843 aa18■□□□□ 0.47
SSU72-203ENST00000378725 GPR19Q15760 415 aa18■□□□□ 0.47
SSU72-203ENST00000378725 C18orf21Q32NC0 220 aaPredicted RBP18■□□□□ 0.47
SSU72-203ENST00000378725 LARP7Q4G0J3 582 aaKnown RBP eCLIP18■□□□□ 0.47
SSU72-203ENST00000378725 FBXO42Q6P3S6 717 aa18■□□□□ 0.47
SSU72-203ENST00000378725 THOC6Q86W42 341 aaKnown RBP18■□□□□ 0.47
SSU72-203ENST00000378725 PAQR7Q86WK9 346 aa18■□□□□ 0.47
SSU72-203ENST00000378725 TMEM151AQ8N4L1 468 aa18■□□□□ 0.47
SSU72-203ENST00000378725 MYRIPQ8NFW9 859 aa18■□□□□ 0.47
SSU72-203ENST00000378725 ALKBH8Q96BT7 664 aaKnown RBP18■□□□□ 0.47
SSU72-203ENST00000378725 TMEM79Q9BSE2 394 aa18■□□□□ 0.47
SSU72-203ENST00000378725 ENAMQ9NRM1 1142 aa18■□□□□ 0.47
SSU72-203ENST00000378725 ABCF3Q9NUQ8 709 aa18■□□□□ 0.47
SSU72-203ENST00000378725 PCMTD2Q9NV79 361 aa18■□□□□ 0.47
SSU72-203ENST00000378725 TMEM184CQ9NVA4 438 aa18■□□□□ 0.47
SSU72-203ENST00000378725 FOXJ2Q9P0K8 574 aa18■□□□□ 0.47
SSU72-203ENST00000378725 PLCL2Q9UPR0 1127 aa18■□□□□ 0.47
SSU72-203ENST00000378725 FOXO6A8MYZ6 492 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 H3BMH7 237 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 GOLGA8RI6L899 631 aa17.99■□□□□ 0.47
SSU72-203ENST00000378725 UBXN8O00124 270 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms