RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ZNF682O95780 498 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CKMP06732 381 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 C8GP07360 202 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CCDC159P0C7I6 412 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ITGAMP11215 1152 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 GABRR2P28476 465 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 HLA-FP30511 346 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 UGT8Q16880 541 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CRTC3Q6UUV7 619 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 DCDC5Q6ZRR9 648 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 GPR155Q7Z3F1 870 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 VTCN1Q7Z7D3 282 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ZNF554Q86TJ5 538 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SERPINA11Q86U17 422 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CMTM8Q8IZV2 173 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CPXM2Q8N436 756 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 FAR1Q8WVX9 515 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ZNF566Q969W8 418 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 TBC1D20Q96BZ9 403 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CCDC138Q96M89 665 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ENPP5Q9UJA9 477 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 C5orf42Q9H799 3197 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SGTAO43765 313 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 MAN1A2O60476 641 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SEMG1P04279 462 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 OR56A5P0C7T3 313 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 IGFBP5P24593 272 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 EPHA2P29317 976 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 KIR3DL1P43629 444 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SPINT3P49223 89 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 HNMTP50135 292 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 PSMD7P51665 324 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 RAD23AP54725 363 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 PFN3P60673 137 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SNRPD1P62314 119 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 VLDLRP98155 873 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 TOP3AQ13472 1001 aaPredicted RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 IL18R1Q13478 541 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SIM2Q14190 667 aaPredicted RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 RFX4Q33E94 735 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 MPPE1Q53F39 396 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ZCCHC8Q6NZY4 707 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 DPY19L3Q6ZPD9 716 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 USP45Q70EL2 814 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 PIWIL3Q7Z3Z3 882 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 PTOV1Q86YD1 416 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 SLC39A11Q8N1S5 342 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 ABHD11Q8NFV4 315 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 TRUB1Q8WWH5 349 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 PPP1R14BQ96C90 147 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 VWCEQ96DN2 955 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 FCRL1Q96LA6 429 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 GABARAPL1Q9H0R8 117 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 RAD21L1Q9H4I0 556 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 BRD9Q9H8M2 597 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 MRPL17Q9NRX2 175 aaKnown RBP10.61□□□□□ -0.71
BEST1-201ENST00000378043 HS3ST2Q9Y278 367 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 BTBD3Q9Y2F9 522 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 TMED5Q9Y3A6 229 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 PCDHGB1Q9Y5G3 927 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 DGKBQ9Y6T7 804 aa10.61□□□□□ -0.71
BEST1-201ENST00000378043 CLIC1O00299 241 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 UGT2B4P06133 528 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HNRNPCP07910 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
BEST1-201ENST00000378043 HIST1H2AGP0C0S8 130 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 CYP4B1P13584 511 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 GJA1P17302 382 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ENGP17813 658 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 GPX2P18283 190 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HIST1H2ADP20671 130 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HOXD10P28358 340 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 FMO3P31513 532 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 CHIT1Q13231 466 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SF1Q15637 639 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 LDLRAP1Q5SW96 308 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 OR2T5Q6IEZ7 315 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 C22orf39Q6P5X5 142 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 B3GNT8Q7Z7M8 397 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 RASGRP3Q8IV61 690 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ZZZ3Q8IYH5 903 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 TCAIMQ8N3R3 496 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 DDHD1Q8NEL9 900 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 OR2T29Q8NH02 315 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HIST1H2AHQ96KK5 128 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HIST1H2AJQ99878 128 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 DPH2Q9BQC3 489 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 RHNO1Q9BSD3 238 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 H2AFJQ9BTM1 129 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SMG9Q9H0W8 520 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 B4GALT6Q9UBX8 382 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SLCO3A1Q9UIG8 710 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SAMD4AQ9UPU9 718 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 hCG_2039718K7EN88 272 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms