RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 BMXP51813 675 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 OR4D1Q15615 310 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 USP41Q3LFD5 358 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MPPE1Q53F39 396 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MS4A13Q5J8X5 152 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CHST15Q7LFX5 561 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ISCA2Q86U28 154 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 OOSP2Q86WS3 158 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SPARTQ8N0X7 666 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 LILRA2Q8N149 483 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 FAM46DQ8NEK8 389 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PIGXQ8TBF5 258 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MOCOSQ96EN8 888 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ERMAPQ96PL5 475 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NHSL1Q5SYE7 1610 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 DDNO94850 711 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 IFNGP01579 166 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 TCF3P15923 654 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GSTM3P21266 225 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 BLVRAP53004 296 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 KCNC3Q14003 757 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 FRG2Q64ET8 278 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PHC3Q8NDX5 983 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 DUS3LQ96G46 650 aaKnown RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 FRG2BQ96QU4 278 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PHOX2BQ99453 314 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SLA2Q9H6Q3 261 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SPATA7Q9P0W8 599 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 KCTD3Q9Y597 815 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 XPNPEP2O43895 674 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 TNNI3P19429 210 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GMFBP60983 142 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MXD1Q05195 221 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 FAM110CQ1W6H9 321 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF730Q6ZMV8 503 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 TSPYL5Q86VY4 417 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SLITRK4Q8IW52 837 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 TBC1D15Q8TC07 691 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 AIF1LQ9BQI0 150 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 C3orf14Q9HBI5 128 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MTMR10Q9NXD2 777 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CALML5Q9NZT1 146 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 PRKAG2Q9UGJ0 569 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 CPQQ9Y646 472 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GLI3P10071 1580 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 XYLBO75191 536 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SNX4O95219 450 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 IL7P13232 177 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 KHKP50053 298 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SMAD3P84022 425 aaKnown RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NDUFA9Q16795 377 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF630Q2M218 657 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 KLHL36Q8N4N3 616 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NPWQ8N729 165 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 NR4A3Q92570 626 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 MUL1Q969V5 352 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 TRNT1Q96Q11 434 aaKnown RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 GORASP2Q9H8Y8 452 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 IL1RAPQ9NPH3 570 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 STARD7Q9NQZ5 370 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
PCDH9-202ENST00000377865 EVLQ9UI08 416 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-202ENST00000377865 SLC38A8A6NNN8 435 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 LOC730098B7Z3J9 87 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 HAS3O00219 553 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 SLC6A4P31645 630 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 CENPAP49450 140 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 AGTR2P50052 363 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ADAM15Q13444 863 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 CYBRD1Q53TN4 286 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ADNP2Q6IQ32 1131 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 DSG4Q86SJ6 1040 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
PCDH9-202ENST00000377865 FCRL4Q96PJ5 515 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 POLE4Q9NR33 117 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 TREX1Q9NSU2 369 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ZNF224Q9NZL3 707 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PCTPQ9UKL6 214 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ARNTLO00327 626 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PCDH7O60245 1069 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 SLC19A2O60779 497 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 RAB36O95755 333 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PTGS2P35354 604 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 CXCR4P61073 352 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PIGFQ07326 219 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 NAE1Q13564 534 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 CCDC157Q569K6 752 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 ENPP6Q6UWR7 440 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PHACTR4Q8IZ21 702 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 PELI3Q8N2H9 469 aa8.54□□□□□ -1.04
PCDH9-202ENST00000377865 SLC35A5Q9BS91 424 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms