RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 VPS9D1Q9Y2B5 631 aa20.12■□□□□ 0.81
VSX1-201ENST00000376707 HS3ST3B1Q9Y662 390 aa20.12■□□□□ 0.81
VSX1-201ENST00000376707 MAU2Q9Y6X3 613 aa20.12■□□□□ 0.81
VSX1-201ENST00000376707 USP9XQ93008 2570 aaPredicted RBP20.12■□□□□ 0.81
VSX1-201ENST00000376707 PGRMC1O00264 195 aaKnown RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 SOCS6O14544 535 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 SEMA7AO75326 666 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ALOX12BO75342 701 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ERVK-10P10266 1014 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 FASTKQ14296 549 aaKnown RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 RBBP7Q16576 425 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ANKRD20A4Q4UJ75 823 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ACSBG2Q5FVE4 666 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 NEPROQ6NW34 567 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 CCDC137Q6PK04 289 aaKnown RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 RNF44Q7L0R7 432 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 PRR7Q8TB68 274 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ZFYVE21Q9BQ24 234 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 DPH7Q9BTV6 452 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 GRPEL1Q9HAV7 217 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ZBTB20Q9HC78 741 aaPredicted RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 XAB2Q9HCS7 855 aaKnown RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 ZNF304Q9HCX3 659 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 FAM114A2Q9NRY5 505 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 SEMA3GQ9NS98 782 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 ASF1BQ9NVP2 202 aa20.11■□□□□ 0.81
VSX1-201ENST00000376707 USP9YO00507 2555 aaPredicted RBP20.11■□□□□ 0.81
VSX1-201ENST00000376707 LOC105369274A0A096LPK9 316 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 LOC102723532A0A0G2JNH3 316 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 FAM237BA0A1B0GVD1 139 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 MAGEB16A2A368 324 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 ARHGEF33A8MVX0 844 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 NRP2O60462 931 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 RPA3P35244 121 aaPredicted RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 TSTA3Q13630 321 aaPredicted RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 KLHL38Q2WGJ6 581 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 PRMT9Q6P2P2 845 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 KIRREL2Q6UWL6 708 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 CENPUQ71F23 418 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 CILP2Q8IUL8 1156 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 OR4N4Q8N0Y3 316 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 DTWD1Q8N5C7 304 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 ACTRT1Q8TDG2 376 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 COG1Q8WTW3 980 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 SMPDL3AQ92484 453 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 CRB3Q9BUF7 120 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 INTS10Q9NVR2 710 aaKnown RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 CUEDC1Q9NWM3 386 aaPredicted RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 GALPQ9UBC7 116 aa20.1■□□□□ 0.81
VSX1-201ENST00000376707 RP1L1Q8IWN7 2480 aaPredicted RBP20.1■□□□□ 0.81
VSX1-201ENST00000376707 OR2A25A4D2G3 310 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 SDR42E2A6NKP2 422 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 PSIP1O75475 530 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 USP1O94782 785 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 CATP04040 527 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 ERGP11308 486 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 MAGEA3P43357 314 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 YBX1P67809 324 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 OCA2Q04671 838 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 THOC5Q13769 683 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 DHX34Q14147 1143 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 NR6A1Q15406 480 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 MUM1Q2TAK8 710 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 TTLL9Q3SXZ7 439 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 C4orf17Q53FE4 359 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 AGAP7PQ5VUJ5 663 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 ZNF470Q6ECI4 717 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 SUSD1Q6UWL2 747 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 Q6ZS92 163 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 SLC35F6Q8N357 371 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 ZNF669Q96BR6 464 aaPredicted RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 AGAP4Q96P64 663 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 OSBPL9Q96SU4 736 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 TRIM56Q9BRZ2 755 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 MRPS30Q9NP92 439 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 PLEKHB1Q9UF11 243 aaPredicted RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 COPG1Q9Y678 874 aaKnown RBP20.09■□□□□ 0.81
VSX1-201ENST00000376707 SHANK1Q9Y566 2161 aa20.09■□□□□ 0.81
VSX1-201ENST00000376707 CTAGE9A4FU28 777 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 VSTM2BA6NLU5 285 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 ZNF839A8K0R7 811 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 MYO1CO00159 1063 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 CES2O00748 559 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 ZSCAN12O43309 604 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 PHF2O75151 1096 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 VPS26AO75436 327 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 MED26O95402 600 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 HSD17B2P37059 387 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 GLRBP48167 497 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 CARSP49589 748 aaKnown RBP20.08■□□□□ 0.81
VSX1-201ENST00000376707 ARHGAP19Q14CB8 494 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 PARP9Q8IXQ6 854 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 PRSS58Q8IYP2 241 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 STT3BQ8TCJ2 826 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 INPP5DQ92835 1189 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 MIEF2Q96C03 454 aa20.08■□□□□ 0.81
VSX1-201ENST00000376707 CABS1Q96KC9 395 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms