RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DGCR6Q14129 220 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 GRIN2CQ14957 1233 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 SMN1Q16637 294 aaKnown RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 SYTL3Q4VX76 610 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 PDE12Q6L8Q7 609 aaKnown RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 DDX53Q86TM3 631 aaKnown RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 KLHL23Q8NBE8 558 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 GLB1L3Q8NCI6 653 aaPredicted RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 CPPED1Q9BRF8 314 aaPredicted RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 FADS2P1A8MWK0 482 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 EVPLLA8MZ36 301 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 NOL3O60936 208 aaKnown RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 INMTO95050 263 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 OPN1SWP03999 348 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 PFN3P60673 137 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 RAPSNQ13702 412 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 DOC2AQ14183 400 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 C6orf141Q5SZD1 244 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 SH3GL1Q99961 368 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 TIMMDC1Q9NPL8 285 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 THG1LQ9NWX6 298 aaKnown RBP16.55■□□□□ 0.24
RXRB-201ENST00000374680 PRKAB1Q9Y478 270 aa16.55■□□□□ 0.24
RXRB-201ENST00000374680 ARHGEF33A8MVX0 844 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 MAGEB17A8MXT2 336 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 KPNA3O00505 521 aaPredicted RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 CYP2A7P20853 494 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 CRHBPP24387 322 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ERVFC1P60507 584 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 FXNQ16595 210 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 SPATS1Q496A3 300 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 PIWIL3Q7Z3Z3 882 aaKnown RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 CYP4Z1Q86W10 505 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ARL10Q8N8L6 244 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 CHDHQ8NE62 594 aaPredicted RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 FAM81AQ8TBF8 368 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 PYURFQ96I23 114 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 OSBPL6Q9BZF3 934 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 RMND5AQ9H871 391 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 KNL1Q8NG31 2342 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 GNG14A0A1W2PPG7 69 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 KLHL33A6NCF5 533 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 GRM6O15303 877 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 SCELO95171 688 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 SLC16A8O95907 504 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 AMD1P17707 334 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 VEGFBP49765 207 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 NUP107P57740 925 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 STARD3Q14849 445 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ACOX1Q15067 660 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 BROXQ5VW32 411 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ELMOD1Q8N336 334 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 CBARPQ8N350 705 aaPredicted RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 C1orf52Q8N6N3 182 aaKnown RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 OR4K1Q8NGD4 311 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 ZSWIM3Q96MP5 696 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 HERC2P3Q9BVR0 1158 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 TMEM121BQ9BXQ6 578 aaPredicted RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 KCNH6Q9H252 994 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 RDH14Q9HBH5 336 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 AMBNQ9NP70 447 aa16.54■□□□□ 0.24
RXRB-201ENST00000374680 TUBA8Q9NY65 449 aaPredicted RBP16.54■□□□□ 0.24
RXRB-201ENST00000374680 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 MAP2K4P45985 399 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ACSM2AQ08AH3 577 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 MESP2Q0VG99 397 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 UGT8Q16880 541 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ACSM2BQ68CK6 577 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ELMSAN1Q6PJG2 1045 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ZNF773Q6PK81 442 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 Q6ZPB1 254 aaPredicted RBP16.53■□□□□ 0.24
RXRB-201ENST00000374680 THOC6Q86W42 341 aaKnown RBP16.53■□□□□ 0.24
RXRB-201ENST00000374680 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
RXRB-201ENST00000374680 SPARTQ8N0X7 666 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 CSF3RQ99062 836 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ACAT2Q9BWD1 397 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 RAPGEFL1Q9UHV5 662 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 ERN1O75460 977 aaKnown RBP16.53■□□□□ 0.24
RXRB-201ENST00000374680 DGKEP52429 567 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 VLDLRP98155 873 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 PPP2R2BQ00005 443 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 TTC23Q5W5X9 447 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 GPR149Q86SP6 731 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 RAVER1Q8IY67 606 aaKnown RBP16.53■□□□□ 0.24
RXRB-201ENST00000374680 NINQ8N4C6 2090 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 EYSQ5T1H1 3165 aa16.53■□□□□ 0.24
RXRB-201ENST00000374680 H0YAE9 185 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 LATS1O95835 1130 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 HTR1AP08908 422 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 HLA-EP13747 358 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 ACPPP15309 386 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 LAG3P18627 525 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 PTPN6P29350 595 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 SLC7A9P82251 487 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms