RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 C11orf65Q8NCR3 313 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 FAM81AQ8TBF8 368 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 IFT80Q9P2H3 777 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 GSAPA4D1B5 854 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 SLC28A2O43868 658 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 S100A5P33763 92 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 HNMTP50135 292 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 IHHQ14623 411 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 PCBP2Q15366 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 MEP1AQ16819 746 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ARMC6Q6NXE6 501 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 LRRC70Q7Z2Q7 622 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 INPP5KQ9BT40 448 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 MAP10Q9P2G4 905 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 AP3M1Q9Y2T2 418 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 FAM220BPB1ANY3 271 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TARM1B6A8C7 271 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ALPPL2P10696 532 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 GDI1P31150 447 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 OR1E2P47887 323 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 CTSCP53634 463 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ZNF805Q5CZA5 627 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 MFSD4BQ5TF39 518 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TFGQ92734 400 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ZNF641Q96N77 438 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 RAD9AQ99638 391 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 KLHL25Q9H0H3 589 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 RPF2Q9H7B2 306 aaKnown RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TRIM45Q9H8W5 580 aaPredicted RBP13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 TMEM181Q9P2C4 612 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 FBXW2Q9UKT8 454 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 ENTPD4Q9Y227 616 aa13.17□□□□□ -0.3
CLIC4-201ENST00000374379 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 FGF19O95750 216 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 DNTTP04053 509 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 ASMTP46597 345 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 SELPLGQ14242 412 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 GALNT15Q8N3T1 639 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CELF5Q8N6W0 485 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 FAM110BQ8TC76 370 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 TMIGD2Q96BF3 282 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 P2RY13Q9BPV8 354 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 AIF1LQ9BQI0 150 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 PDFQ9HBH1 243 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CEP350Q5VT06 3117 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CCNA2P20248 432 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 C21orf59P57076 290 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 TAS2R50P59544 299 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 EPS8Q12929 822 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 Q6ZSR9 355 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 UTS2BQ765I0 119 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 DLGAP4Q9Y2H0 992 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 A6NHS1 94 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 GLOD5A6NK44 160 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 E7EQ34 232 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 H3BNX3 289 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 EEDO75530 441 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 ZNF30P17039 623 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 R3HCC1LQ7Z5L2 792 aaKnown RBP13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
CLIC4-201ENST00000374379 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 ABLIM3O94929 683 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 APODP05090 189 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 DBTP11182 482 aaKnown RBP13.15□□□□□ -0.3
CLIC4-201ENST00000374379 ARSFP54793 590 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 HIPK1Q86Z02 1210 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 CPA6Q8N4T0 437 aa13.15□□□□□ -0.3
CLIC4-201ENST00000374379 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms