RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CLCN4P51793 760 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GJA9P57773 515 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 NPTX1Q15818 432 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GRHL2Q6ISB3 625 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 LRRC70Q7Z2Q7 622 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 RBM12BQ8IXT5 1001 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 OR5T3Q8NGG3 340 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 C14orf105Q9NVL8 296 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 H3BSA7 217 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ENPP3O14638 875 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 OR1I1O60431 355 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 VARSP26640 1264 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CSKP41240 450 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 PRR5P85299 388 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CD83Q01151 205 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF33AQ06730 810 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GPR33Q49SQ1 333 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ZNF311Q5JNZ3 666 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 RAB11FIP2Q7L804 512 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 RANBP3LQ86VV4 465 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 FGF3P11487 239 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CSTF1Q05048 431 aaKnown RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 IQCCQ4KMZ1 466 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 GPR153Q6NV75 609 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CHRDL2Q6WN34 429 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SLC22A16Q86VW1 577 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 CDKN2AIPNLQ96HQ2 116 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SIGLEC10Q96LC7 697 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 SIRPGQ9P1W8 387 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 HS3ST4Q9Y661 456 aa13.88□□□□□ -0.19
LMX1B-202ENST00000373474 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TTC24A2A3L6 582 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SEPT4O43236 478 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 APODP05090 189 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 LAMP2P13473 410 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TPRG1LQ5T0D9 272 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 PIM3Q86V86 326 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TOMM5Q8N4H5 51 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 C2CD4AQ8NCU7 369 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 OR10G2Q8NGC3 310 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 MYOCQ99972 504 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 LGR4Q9BXB1 951 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 USP29Q9HBJ7 922 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 COMMD3Q9UBI1 195 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 EFNA1P20827 205 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 CD72P21854 359 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 VAMP2P63027 116 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 PCDH1Q08174 1060 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TOMM20Q15388 145 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 EMC10Q5UCC4 262 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 DERL2Q9GZP9 239 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3DA0A087WVF3 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3IA0A087WXS9 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3EA0A087X179 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3KA0A087X1G2 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3FA6NER0 549 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3LB9A6J9 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 FKTNO75072 461 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3HP0C7X1 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 GNAZP19086 355 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 STXBP1P61764 594 aaKnown RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 RHDQ02161 417 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SH3D19Q5HYK7 790 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 FAM91A1Q658Y4 838 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3GQ6DHY5 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3CQ6IPX1 549 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D3Q8IZP1 549 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 UBE2J2Q8N2K1 259 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 DEC1Q9P2X7 70 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 EDARQ9UNE0 448 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 PCDH7O60245 1069 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 GSTT2P0CG29 244 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 NT5EP21589 574 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 ADAM15Q13444 863 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SLC2A7Q6PXP3 512 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SDR16C5Q8N3Y7 309 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SLC37A3Q8NCC5 494 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 SLC39A3Q9BRY0 314 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 TBC1D17Q9HA65 648 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
LMX1B-202ENST00000373474 NFATC1O95644 943 aa13.86□□□□□ -0.19
LMX1B-202ENST00000373474 ELNP15502 786 aa13.86□□□□□ -0.19
LMX1B-202ENST00000373474 PRSS55Q6UWB4 352 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-202ENST00000373474 GOLGA7Q7Z5G4 137 aa13.86□□□□□ -0.19
LMX1B-202ENST00000373474 ZFP3Q96NJ6 502 aa13.86□□□□□ -0.19
LMX1B-202ENST00000373474 SLC29A3Q9BZD2 475 aa13.86□□□□□ -0.19
LMX1B-202ENST00000373474 CCDC86Q9H6F5 360 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms