RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 RFXAPO00287 272 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SSX4O60224 188 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM20BO75063 409 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 DNAJB5O75953 348 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HNRNPA1P09651 372 aaKnown RBP eCLIP10.9□□□□□ -0.663e-7■■■□□ 15.2
RPRD1B-201ENST00000373433 HIST1H2AGP0C0S8 130 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HIST1H2ADP20671 130 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FMO4P31512 558 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 GNG2P59768 71 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 LRRC74AQ0VAA2 488 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 GALNT1Q10472 559 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ZNF181Q2M3W8 571 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM214AQ32MH5 1076 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SDE2Q6IQ49 451 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SERPINA13PQ6UXR4 307 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM124AQ86V42 546 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FNDC5Q8NAU1 212 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 PTERQ96BW5 349 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TIFAQ96CG3 184 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TCEAL4Q96EI5 215 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HIST1H2AHQ96KK5 128 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HBEGFQ99075 208 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HIST1H2AJQ99878 128 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 H2AFJQ9BTM1 129 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 THUMPD3Q9BV44 507 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TTLL2Q9BWV7 592 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 RASSF1Q9NS23 344 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 PAQR5Q9NXK6 330 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TPRKBQ9Y3C4 175 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM92AA1XBS5 289 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 KMOO15229 486 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 LCKP06239 509 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 RCAN2Q14206 197 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 LY6G5CQ5SRR4 150 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TPRG1LQ5T0D9 272 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 OTUD1Q5VV17 481 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 LINC00299Q6ZSB3 139 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ISCA2Q86U28 154 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 LACC1Q8IV20 430 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 UMODL1-AS1Q8N2C9 162 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 CSGALNACT1Q8TDX6 532 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SLC47A1Q96FL8 570 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 UGT2B28Q9BY64 529 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ACTR8Q9H981 624 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 PLSCR3Q9NRY6 295 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 DNAJB9Q9UBS3 223 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ADGRE2Q9UHX3 823 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 PCDHGA10Q9Y5H3 936 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 GPR45Q9Y5Y3 372 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 CENPFP49454 3210 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 SPTAN1Q13813 2472 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ICMTO60725 284 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 NFATC1O95644 943 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 PTTG1O95997 202 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 DDX6P26196 483 aaKnown RBP eCLIP10.9□□□□□ -0.663e-9■■■■□ 19.5
RPRD1B-201ENST00000373433 CLCN5P51795 746 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 CDKN2DP55273 166 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ACOX1Q15067 660 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ATXN7L2Q5T6C5 722 aaPredicted RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 AGAP6Q5VW22 663 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 NEK10Q6ZWH5 1172 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 AHSA2Q719I0 299 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 AGAP4Q96P64 663 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 ACOX2Q99424 681 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 COQ7Q99807 217 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 VN1R3Q9BXE9 311 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 BRD9Q9H8M2 597 aa10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 CARS2Q9HA77 564 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-201ENST00000373433 OR51F1A6NGY5 319 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 AGAP5A6NIR3 686 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 ZW10O43264 779 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 HPRP00739 348 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 HLA-DPA1P20036 260 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 IFNA8P32881 189 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 MASP1P48740 699 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 SERINC3Q13530 473 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 CEP78Q5JTW2 689 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 CHST9Q7L1S5 443 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 PHYKPLQ8IUZ5 450 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 HID1Q8IV36 788 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 SLC39A13Q96H72 371 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 SH3GL1Q99961 368 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 SLC46A2Q9BY10 475 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 NUAK2Q9H093 628 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 C14orf119Q9NWQ9 140 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 USE1Q9NZ43 259 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 EIF3LQ9Y262 564 aaKnown RBP10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 RAI2Q9Y5P3 530 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 AIREO43918 545 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 PBX2P40425 430 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 DGKQP52824 942 aa10.89□□□□□ -0.67
RPRD1B-201ENST00000373433 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms