RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 PNLIPRP1P54315 467 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 ACTR1AP61163 376 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 AMZ1Q400G9 498 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF248Q8NDW4 579 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 NEK6Q9HC98 313 aa13.02□□□□□ -0.32
RAPGEF1-201ENST00000372189 GABRDO14764 452 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ASMTP46597 345 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ACTR3P61158 418 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 GALNT7Q86SF2 657 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZZZ3Q8IYH5 903 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 AGAP2Q99490 1192 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 TAS2R1Q9NYW7 299 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 B4DGG1 531 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 TNFRSF11BO00300 401 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM189A2Q15884 450 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 MPP5Q8N3R9 675 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ADH1BP00325 375 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 IFNGP01579 166 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 PGRP06401 933 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ITPKBP27987 946 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 FOXN2P32314 431 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF267Q14586 743 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 NCBP2-AS2Q69YL0 99 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 AHSA2Q719I0 299 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 ADAMTS15Q8TE58 950 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 LIN37Q96GY3 246 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 MED28Q9H204 178 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 TOR3AQ9H497 397 aa13.02□□□□□ -0.33
RAPGEF1-201ENST00000372189 KDELR3O43731 214 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 RAB4BP61018 213 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 DSN1Q9H410 356 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 KAT8Q9H7Z6 458 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 MRPS30Q9NP92 439 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 PDPK1O15530 556 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 UROSP10746 265 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 UGT1A5P35504 534 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ACVRL1P37023 503 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 KIR3DL1P43629 444 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 CDH11P55287 796 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF155Q12901 538 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 GPR33Q49SQ1 333 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF613Q6PF04 617 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 RPTNQ6XPR3 784 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SSX6Q7RTT6 188 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 CYP2S1Q96SQ9 504 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 GPATCH1Q9BRR8 931 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 EBF2Q9HAK2 575 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ABI3Q9P2A4 366 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 CPED1A4D0V7 1026 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SCN2BO60939 215 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SNAP29O95721 258 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 VARSP26640 1264 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 GJA5P36382 358 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 HSD17B2P37059 387 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 C2orf80Q0P641 193 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZCCHC10Q8TBK6 192 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 TMCO6Q96DC7 493 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 OTUB2Q96DC9 234 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 C1QTNF1Q9BXJ1 281 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 CIB4A0PJX0 185 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 TP73O15350 636 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SGCEO43556 437 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ALPIP09923 528 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ACP5P13686 325 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 IGFALSP35858 605 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 LY6G5CQ5SRR4 150 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 TIGD3Q6B0B8 471 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC43A3Q8NBI5 491 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC30A4O14863 429 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF623O75123 536 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 NDUFS1P28331 727 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC10A7Q0GE19 358 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 LCP2Q13094 533 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZDHHC24Q6UX98 284 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZDHHC18Q9NUE0 388 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 MKLN1Q9UL63 735 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms