RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 IL2P60568 153 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 NFE2Q16621 373 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 GTDC1Q4AE62 458 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 INO80DQ53TQ3 878 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PLEKHH3Q7Z736 793 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 ZSWIM9Q86XI8 627 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PHACTR4Q8IZ21 702 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CACTIN-AS1Q8N1I8 211 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 NUDT8Q8WV74 236 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CHTF18Q8WVB6 975 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CDK15Q96Q40 435 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 OR52E6Q96RD3 313 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 OR51E2Q9H255 320 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 TNKS2Q9H2K2 1166 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 SMURF1Q9HCE7 757 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 RPRD1BQ9NQG5 326 aaKnown RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PRDM5Q9NQX1 630 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 RASSF1Q9NS23 344 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 OLA1Q9NTK5 396 aaKnown RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 TMEM248Q9NWD8 314 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MPP6Q9NZW5 540 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 SPASTQ9UBP0 616 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 SAMHD1Q9Y3Z3 626 aaKnown RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 COMMD10Q9Y6G5 202 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 LOC100506127A0A0U1RQW1 187 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MEIOCA2RUB1 952 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MYO1GB0I1T2 1018 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 TLL1O43897 1013 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PKMP14618 531 aaKnown RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 EPHA2P29317 976 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 GGT2P36268 569 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 SLC19A1P41440 591 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MLLT6P55198 1093 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 GTF2H2Q13888 395 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PTGR1Q14914 329 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CEP78Q5JTW2 689 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 FAM171A1Q5VUB5 890 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 GTF2H2CQ6P1K8 395 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 MSANTD1Q6ZTZ1 278 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 C14orf80Q86SX3 495 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 BPHLQ86WA6 291 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 RNF130Q86XS8 419 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 TCAIMQ8N3R3 496 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 PGBD5Q8N414 524 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 GGHQ92820 318 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 LINGO1Q96FE5 620 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 Q96MT0 163 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 WDFY2Q96P53 400 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 KLHL5Q96PQ7 755 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 EPYCQ99645 322 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 REEP1Q9H902 201 aa10.24□□□□□ -0.77
LYSMD1-201ENST00000368908 SLC35F4A4IF30 521 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 KRT87PA6NCN2 255 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ARVCFO00192 962 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 AP3D1O14617 1153 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 C9P02748 559 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 IFNA8P32881 189 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ARL1P40616 181 aaPredicted RBP10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 IL10RBQ08334 325 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 IRF5Q13568 498 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 PTPRCAPQ14761 206 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 LAPTM4AQ15012 233 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 GPAT3Q53EU6 434 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ARMCX4Q5H9R4 360 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 MORN1Q5T089 497 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ARMC4Q5T2S8 1044 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 GPR142Q7Z601 462 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ADAMTSL2Q86TH1 951 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 KRT73Q86Y46 540 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ZNF683Q8IZ20 524 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 LIX1Q8N485 282 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 FAM109AQ8N4B1 249 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 CPA6Q8N4T0 437 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 CD200R1Q8TD46 325 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 MYLPFQ96A32 169 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 DMRTB1Q96MA1 342 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 OSMRQ99650 979 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 TTYH2Q9BSA4 534 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 CENPOQ9BU64 300 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 SERHLQ9NQF3 203 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 PLSCR3Q9NRY6 295 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 UBA2Q9UBT2 640 aaPredicted RBP10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 SRRDQ9UH36 339 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 PIN4Q9Y237 131 aaKnown RBP10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 PCDHB5Q9Y5E4 795 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 NLRC5Q86WI3 1866 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 PTGESO14684 152 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 TRIM3O75382 744 aaPredicted RBP10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ZNF682O95780 498 aa10.23□□□□□ -0.77
LYSMD1-201ENST00000368908 ITGB6P18564 788 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms