RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ACACAQ13085 2346 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ANKRD11Q6UB99 2663 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 A0A087WV48 116 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 IGKV1-8A0A0C4DH67 115 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZNF839A8K0R7 811 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 STMND1H3BQB6 276 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 KIAA0754O94854 1291 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 DLGAP3O95886 979 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ENO2P09104 434 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 HIST1H2AGP0C0S8 130 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 MSL3P1P0C860 447 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 HIST1H2ADP20671 130 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 CD82P27701 267 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 MSH2P43246 934 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 NAE1Q13564 534 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR4D1Q15615 310 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 CEP85LQ5SZL2 805 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ICE2Q659A1 982 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 GOLGA6L1Q8N7Z2 621 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ALKBH8Q96BT7 664 aaKnown RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 PYCR2Q96C36 320 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 MED8Q96G25 268 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 HIST1H2AHQ96KK5 128 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 HIST1H2AJQ99878 128 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 H2AFJQ9BTM1 129 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 DHRS4Q9BTZ2 278 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 ULBP3Q9BZM4 244 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 CCDC177Q9NQR7 707 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 WDR70Q9NW82 654 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 CUEDC1Q9NWM3 386 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 TMEM184BQ9Y519 407 aaPredicted RBP14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 OARD1Q9Y530 152 aa14.49□□□□□ -0.09
SMPDL3A-201ENST00000368440 KLK10O43240 276 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CTSVO60911 334 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 C2P06681 752 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CRABP2P29373 138 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CMPK1P30085 196 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 AP1S2P56377 157 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 THEMIS2Q5TEJ8 643 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 ADAMTSL2Q86TH1 951 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CENPLQ8N0S6 344 aaPredicted RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 KCTD4Q8WVF5 259 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 FBXL8Q96CD0 374 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 FCRL4Q96PJ5 515 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 DPH7Q9BTV6 452 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 TRIM54Q9BYV2 358 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CHRNA10Q9GZZ6 450 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 MRPS30Q9NP92 439 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 IGSF5Q9NSI5 407 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 FAM53CQ9NYF3 392 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 HEATR5BQ9P2D3 2071 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 H3BMH7 237 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 POLR3GO15318 223 aaPredicted RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 RRP8O43159 456 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 MAP3K7O43318 606 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 RAD1O60671 282 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 FKBP9O95302 570 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 NTRK1P04629 796 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 SERPINB8P50452 374 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CBX1P83916 185 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 PRDX1Q06830 199 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 PRAMEF13Q5VWM6 474 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 CYB5D1Q6P9G0 228 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 VASH2Q86V25 355 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 GALNT6Q8NCL4 622 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 NKD1Q969G9 470 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 NXNL1Q96CM4 212 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 SGPP1Q9BX95 441 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 SPRTNQ9H040 489 aaPredicted RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 SYNPO2LQ9H987 977 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 FANCEQ9HB96 536 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 INTS7Q9NVH2 962 aaKnown RBP14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZNF180Q9UJW8 692 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 KLK4Q9Y5K2 254 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 IKBKGQ9Y6K9 419 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 SPTBP11277 2137 aa14.48□□□□□ -0.09
SMPDL3A-201ENST00000368440 A0A096LPK6 155 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR2A25A4D2G3 310 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 PABPN1LA6NDY0 278 aaKnown RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 NCF1BA6NI72 391 aaPredicted RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 NCF1CA8MVU1 366 aaPredicted RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 TRIM49D1C9J1S8 452 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 SCRG1O75711 98 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 NCF1P14598 390 aaPredicted RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 MAGEA12P43365 314 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 KCNC1P48547 511 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 SERPINB9P50453 376 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 ATP6V0D1P61421 351 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 TLE3Q04726 772 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 LRRC69Q6ZNQ3 347 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 FRA10AC1Q70Z53 315 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 TBC1D1Q86TI0 1168 aaPredicted RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 TMEM126BQ8IUX1 230 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 SLC38A9Q8NBW4 561 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR56A3Q8NH54 315 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 ISL2Q96A47 359 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 CRELD1Q96HD1 420 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 EGFL8Q99944 293 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms