RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 RAB11FIP2Q7L804 512 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 VASH1Q7L8A9 365 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 FAM20CQ8IXL6 584 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 APCDD1Q8J025 514 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 CRB3Q9BUF7 120 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 CDC42EP4Q9H3Q1 356 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 PYCARDQ9ULZ3 195 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 RAP2CQ9Y3L5 183 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 STX16-NPEPL1H3BU86 382 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 STX16O14662 325 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 VNN2O95498 520 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 ETV3P41162 512 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 GBE1Q04446 702 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 ZKSCAN8Q15776 578 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 TMEM44Q2T9K0 475 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 ZCCHC12Q6PEW1 402 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 CCNI2Q6ZMN8 369 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 LRRC1Q9BTT6 524 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 TM9SF3Q9HD45 589 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 WSB2Q9NYS7 404 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 ACTR10Q9NZ32 417 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 STMN3Q9NZ72 180 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 NOP16Q9Y3C1 178 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 C4orf47A7E2U8 309 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 ANHXE9PGG2 379 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 LDB2O43679 373 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 NPHS1O60500 1241 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 KITP10721 976 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 PNLIPP16233 465 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 EPORP19235 508 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 GGCXP38435 758 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 HK3P52790 923 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 TRA2BP62995 288 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 RHDQ02161 417 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 MFSD13AQ14CX5 517 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 EIF2S3LQ2VIR3 472 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 TANKQ92844 425 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 CAVIN3Q969G5 261 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 RMND5BQ96G75 393 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 SSU72Q9NP77 194 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 EMC3Q9P0I2 261 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 PTRH2Q9Y3E5 179 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 LOXL2Q9Y4K0 774 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 TUBGCP6Q96RT7 1819 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 C1orf226A1L170 272 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 FTCDNL1E5RQL4 147 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 WDPCPO95876 746 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 DPTQ07507 201 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 EPS8Q12929 822 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 MELKQ14680 651 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 ZNF630Q2M218 657 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 CAPRIN2Q6IMN6 1127 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 THOC6Q86W42 341 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 GPALPP1Q8IXQ4 340 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 NLGN4XQ8N0W4 816 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 NLGN4YQ8NFZ3 816 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 JPH3Q8WXH2 748 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 ART4Q93070 314 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 METTL2AQ96IZ6 378 aaKnown RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 FAM118BQ9BPY3 351 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 KIFC1Q9BW19 673 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 TAS2R9Q9NYW1 312 aa8.05□□□□□ -1.12
SSR2-202ENST00000368311 FBXO9Q9UK97 447 aaPredicted RBP8.05□□□□□ -1.12
SSR2-202ENST00000368311 J3KR12 359 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 FARS2O95363 451 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 FHP07954 510 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 ZNF28P17035 718 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 FKBP2P26885 142 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 SOX11P35716 441 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 GLRBP48167 497 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SOX9P48436 509 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SLC1A6P48664 564 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 CSNK1EP49674 416 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 STK19P49842 368 aaPredicted RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 PRKG2Q13237 762 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 FAM98BQ52LJ0 330 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 LCN1P1Q5VSP4 162 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 KRT80Q6KB66 452 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 RINLQ6ZS11 566 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 Q6ZVL8 140 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 IKBIPQ70UQ0 350 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 BMP8AQ7Z5Y6 402 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 MISPQ8IVT2 679 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SECISBP2Q96T21 854 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 SCN3BQ9NY72 215 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SPHK1Q9NYA1 384 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 TAC3Q9UHF0 121 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SUFUQ9UMX1 484 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 ZNF726A6NNF4 738 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SCRG1O75711 98 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 GP1BAP07359 652 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 ANXA4P09525 319 aaPredicted RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 EBLN1P0CF75 366 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 SP9P0CG40 484 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 GP1BBP13224 206 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 HMGA1P17096 107 aaKnown RBP8.04□□□□□ -1.12
SSR2-202ENST00000368311 CYTH1Q15438 398 aa8.04□□□□□ -1.12
SSR2-202ENST00000368311 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms