RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 ERGIC2Q96RQ1 377 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 COPS8Q99627 209 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 NPAS2Q99743 824 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 UTP23Q9BRU9 249 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 TUBB6Q9BUF5 446 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 THAP2Q9H0W7 228 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 VPS37BQ9H9H4 285 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 C14orf105Q9NVL8 296 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 STOX2Q9P2F5 926 aaPredicted RBP13.88□□□□□ -0.19
VAMP4-202ENST00000367740 HIVEP2P31629 2446 aa13.88□□□□□ -0.19
VAMP4-202ENST00000367740 IGLV3-16A0A075B6K0 115 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 A0A1B0GTH9 108 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 CTSVO60911 334 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 NEURL1O76050 574 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 HEXBP07686 556 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 PTPN3P26045 913 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-202ENST00000367740 FRMPD2BQ6IN97 320 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 H3F3CQ6NXT2 135 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 FIGLAQ6QHK4 219 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 ULK4Q96C45 1275 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 ZNF354BQ96LW1 612 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 TEKT5Q96M29 485 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 ISCUQ9H1K1 167 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 FAM96AQ9H5X1 160 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 TRPC4Q9UBN4 977 aa13.87□□□□□ -0.19
VAMP4-202ENST00000367740 MAN1A2O60476 641 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 AP2A1O95782 977 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 RAF1P04049 648 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 SP1P08047 785 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 NFKB1P19838 968 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 NUP107P57740 925 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 NPNTQ6UXI9 565 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 MICALCLQ6ZW33 695 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 TAX1BP1Q86VP1 789 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 CRLF3Q8IUI8 442 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 GOT1L1Q8NHS2 421 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 HEXDCQ8WVB3 486 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 OXNAD1Q96HP4 312 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 MENTQ9BUN1 341 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 TP63Q9H3D4 680 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 ZNF395Q9H8N7 513 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 INTS7Q9NVH2 962 aaKnown RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 ZC3H7BQ9UGR2 993 aaKnown RBP13.86□□□□□ -0.19
VAMP4-202ENST00000367740 ANK2Q01484 3957 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 DNAJC13O75165 2243 aa13.86□□□□□ -0.19
VAMP4-202ENST00000367740 LOC105369274A0A096LPK9 316 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 LOC102723532A0A0G2JNH3 316 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 LRRC53A6NM62 1247 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 NRP2O60462 931 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 SRPX2O60687 465 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-202ENST00000367740 SEC24DO94855 1032 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-202ENST00000367740 TAS2R40P59535 323 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 UBXN1Q04323 297 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 SNTB1Q13884 538 aaKnown RBP13.85□□□□□ -0.19
VAMP4-202ENST00000367740 PDK1Q15118 436 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 TAZQ16635 292 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 BTBD16Q32M84 506 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 CHSY3Q70JA7 882 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 OR4N4Q8N0Y3 316 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 C2orf73Q8N5S3 287 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-202ENST00000367740 CLDN19Q8N6F1 224 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 AMER3Q8N944 861 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 OR13C4Q8NGS5 318 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 COX4I2Q96KJ9 171 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 OLFM1Q99784 485 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 FICDQ9BVA6 458 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 TGIF2Q9GZN2 237 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-202ENST00000367740 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
VAMP4-202ENST00000367740 IGHV3-20A0A0C4DH32 117 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 INAFM1C9JVW0 142 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 LIN7AO14910 233 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-202ENST00000367740 PPP1R12AO14974 1030 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-202ENST00000367740 NME2P1O60361 137 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 NME2P22392 152 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-202ENST00000367740 CDKN1CP49918 316 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-202ENST00000367740 PMPCAQ10713 525 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 TAF1AQ15573 450 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-202ENST00000367740 MEP1AQ16819 746 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 MUM1Q2TAK8 710 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 EMC4Q5J8M3 183 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 SLC9A4Q6AI14 798 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 SLC25A25Q6KCM7 469 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 ARSKQ6UWY0 536 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 SNX20Q7Z614 316 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 TMTC1Q8IUR5 882 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 ENOX1Q8TC92 643 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms