RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMIEQ8NEW7 156 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 HTRA1Q92743 480 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 FAM149AA5PLN7 773 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 GRK6P43250 576 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 FAM91A1Q658Y4 838 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 METTL21AQ8WXB1 218 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SIX4Q9UIU6 781 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 RLN1P04808 185 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 C8AP07357 584 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATP1B2P14415 290 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 AVPR1BP47901 424 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 DSTNP60981 165 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 LIPJQ5W064 366 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 DGKBQ9Y6T7 804 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ISPDA4D126 451 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 UPK3BL1B0FP48 263 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 UPK3BL2E5RIL1 263 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF701M0R085 212 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF45Q02386 682 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TARDBPQ13148 414 aaKnown RBP eCLIP11.74□□□□□ -0.532e-9■■■■□ 20.3
CDC42BPA-203ENST00000366766 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SPACA7Q96KW9 195 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TPRP12270 2363 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 NOBOXO60393 691 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SP2Q02086 613 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 IMP4Q96G21 291 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC2A13Q96QE2 648 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 GPC6Q9Y625 555 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 LOC100130705A0A1B0GUX0 176 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 CD36P16671 472 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 CD72P21854 359 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 REEP3Q6NUK4 255 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 DNM1P34Q6PK57 102 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 DCUN1D3Q8IWE4 304 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 MARVELD2Q8N4S9 558 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TWNKQ96RR1 684 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 LAMB2P55268 1798 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 RASAL1O95294 804 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 CLEC4CQ8WTT0 213 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 MMP27Q9H306 513 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 TESMINQ9Y4I5 508 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 PCDHGB2Q9Y5G2 931 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ST14Q9Y5Y6 855 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 RREB1Q92766 1687 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 UGT1A9O60656 530 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 DGKZQ13574 1117 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CRB2Q5IJ48 1285 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 LRRTM4Q86VH4 590 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 RIPOR3Q96MK2 946 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ITPAQ9BY32 194 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 POLR2J2Q9GZM3 115 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ADAM7Q9H2U9 754 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 UGT1A7Q9HAW7 530 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 UGT1A10Q9HAW8 530 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 UGT1A8Q9HAW9 530 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZDHHC2Q9UIJ5 367 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ANXA2P2A6NMY6 339 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHL18O94889 574 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CCL23P55773 120 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHL26Q53HC5 615 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 LINGO4Q6UY18 593 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CAMKVQ8NCB2 501 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 EQTNQ9NQ60 294 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 SNX10Q9Y5X0 201 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 PFKMP08237 780 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CCNIQ14094 377 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 NXPE1Q8N323 547 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR52J3Q8NH60 311 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CRYGNQ8WXF5 182 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR52B2Q96RD2 323 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 DENRO43583 198 aaKnown RBP11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 CAPZA1P52907 286 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ADAM8P78325 824 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF763Q0D2J5 394 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 POM121L1PQ3SYA9 428 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 FRRS1Q6ZNA5 592 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 GPR65Q8IYL9 337 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC9A6Q92581 669 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 M0QX08 132 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 ENTPD6O75354 484 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 NADK2Q4G0N4 442 aa11.73□□□□□ -0.53
CDC42BPA-203ENST00000366766 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms