RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CKLFQ9UBR5 152 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 K7ERQ8 282 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 SHOX2O60902 331 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 PCSK2P16519 638 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 EIPR1Q53HC9 387 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 RBM44Q6ZP01 1051 aaKnown RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 GRHL3Q8TE85 626 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 RNF11Q9Y3C5 154 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 SUN3Q8TAQ9 357 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 CENPNQ96H22 339 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 PSKH2Q96QS6 385 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 GPATCH1Q9BRR8 931 aaKnown RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF395Q9H8N7 513 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 HRASLS2Q9NWW9 162 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ZDHHC2Q9UIJ5 367 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 RGPD2P0DJD1 1756 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 MTHFD1P11586 935 aaKnown RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ATP5A1P25705 553 aaKnown RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 SLC26A3P40879 764 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 OR5M3Q8NGP4 307 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 PIGKQ92643 395 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 HERC2P3Q9BVR0 1158 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 DERL2Q9GZP9 239 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 FZD4Q9ULV1 537 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 DMTF1Q9Y222 760 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 PRORSD1PA6NEY8 169 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 SLC29A4Q7RTT9 530 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 GALNT7Q86SF2 657 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 TMEM156Q8N614 296 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 KBTBD7Q8WVZ9 684 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 A0A1W2PQU0 124 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ELOA3DA6NLF2 546 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 OAZ2O95190 189 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 OPN1SWP03999 348 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 CDH1P12830 882 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 GRIA2P42262 883 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 RPS13P62277 151 aaKnown RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 RUNX3Q13761 415 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 GFOD2Q3B7J2 385 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ELOA3BQ3SY89 546 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.1■□□□□ 0.495e-6■■■■■ 81.8
CLIP2-202ENST00000361545 PLA2G15Q8NCC3 412 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ELOA3Q8NG57 546 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF483Q8TF39 744 aaPredicted RBP18.1■□□□□ 0.49
CLIP2-202ENST00000361545 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 PSAT1Q9Y617 370 aa18.1■□□□□ 0.49
CLIP2-202ENST00000361545 MANBAO00462 879 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PUS10Q3MIT2 529 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF311Q5JNZ3 666 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PERM1Q5SV97 790 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 METTL27Q8N6F8 245 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TXNDC5Q8NBS9 432 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 OR52B2Q96RD2 323 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 RC3H2Q9HBD1 1191 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 LCHNA4D1U4 455 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 CLIC1O00299 241 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TLX3O43711 291 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ANGPTL1O95841 491 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 EPOP01588 193 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ENGP17813 658 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF542PQ5EBM4 170 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF783Q6ZMS7 281 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 MAPK15Q8TD08 544 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 AP3S1Q92572 193 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 DENND2DQ9H6A0 471 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 SPATA7Q9P0W8 599 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 RGS10O43665 173 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ARFIP1P53367 373 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 RPP38P78345 283 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 C1orf220Q5T0J3 134 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 UMODL1-AS1Q8N2C9 162 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 SIGLEC10Q96LC7 697 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 CHID1Q9BWS9 393 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PCDHAC1Q9H158 963 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 IL21RQ9HBE5 538 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TMLHEQ9NVH6 421 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 SERTAD3Q9UJW9 196 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TSPAN6O43657 245 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 RNGTTO60942 597 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 CTSAP10619 480 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 GLDCP23378 1020 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 DSTNP60981 165 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PLGLB1Q02325 96 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TGFBIQ15582 683 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF572Q7Z3I7 529 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 HCAR2Q8TDS4 363 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 JPH3Q8WXH2 748 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 MCCC2Q9HCC0 563 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PIAS3Q9Y6X2 628 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 HAT1O14929 419 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 NOBOXO60393 691 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 PLGP00747 810 aaPredicted RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 WNT7BP56706 349 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 RNASE12Q5GAN4 147 aaKnown RBP18.09■□□□□ 0.49
CLIP2-202ENST00000361545 TMEM126BQ8IUX1 230 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 IGDCC3Q8IVU1 814 aa18.09■□□□□ 0.49
CLIP2-202ENST00000361545 KCNA7Q96RP8 456 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms