RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 KCNJ9Q92806 393 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 TMEM125Q96AQ2 219 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 SLC45A3Q96JT2 553 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 CIB1Q99828 191 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 HGH1Q9BTY7 390 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 ADGRE3Q9BY15 652 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 TRIM54Q9BYV2 358 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 P2RY12Q9H244 342 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 TRIT1Q9H3H1 467 aaKnown RBP7.15□□□□□ -1.26
CLCN3-202ENST00000360642 IL1RL2Q9HB29 575 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 STARD7Q9NQZ5 370 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 AGPAT4Q9NRZ5 378 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 OLAHQ9NV23 265 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 TMEM45AQ9NWC5 275 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
CLCN3-202ENST00000360642 DLGAP1O14490 977 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 SOCS2O14508 198 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 HNRNPRO43390 633 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 PSPNO60542 156 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 SNX2O60749 519 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 EEDO75530 441 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CYP17A1P05093 508 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CKMT2P17540 419 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CORO1AP31146 461 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 TUFMP49411 452 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CLCN7P51798 805 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CAPRIN1Q14444 709 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 PTPRRQ15256 657 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 MYLK3Q32MK0 819 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 PDCD4Q53EL6 469 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 INTS11Q5TA45 600 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 JMJD6Q6NYC1 403 aaPredicted RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 RBM44Q6ZP01 1051 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 Q6ZS46 218 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 EFL1Q7Z2Z2 1120 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 SPPL2CQ8IUH8 684 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 TEX19Q8NA77 164 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 ZFP28Q8NHY6 868 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 TFAP2CQ92754 450 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 WBP2Q969T9 261 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 PDLIM5Q96HC4 596 aaKnown RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF512Q96ME7 567 aaPredicted RBP7.15□□□□□ -1.27
CLCN3-202ENST00000360642 CCT7Q99832 543 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 ANKRD60Q9BZ19 345 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 VCX3AQ9NNX9 186 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 GKN1Q9NS71 199 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 MTRRQ9UBK8 725 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 SRRDQ9UH36 339 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 STOML2Q9UJZ1 356 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 WASF3Q9UPY6 502 aa7.15□□□□□ -1.27
CLCN3-202ENST00000360642 A0A1B0GTW7 788 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TCRBV5S2A0A599 114 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 DHRS12A0PJE2 317 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NCF1BA6NI72 391 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NCF1CA8MVU1 366 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 H6PDO95479 791 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 STAMBPO95630 424 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NCF1P14598 390 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 JUPP14923 745 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PTGER3P43115 390 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NR1H2P55055 460 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SP3Q02447 781 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 DYNC1I2Q13409 638 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 RPS6KA2Q15349 733 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PAGE3Q5JUK9 113 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 HABP4Q5JVS0 413 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF783Q6ZMS7 281 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ZBTB49Q6ZSB9 765 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 GPSM1Q86YR5 675 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 RNF168Q8IYW5 571 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PACRGLQ8N7B6 248 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 OR56A4Q8NGH8 313 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 RGMAQ96B86 450 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 EID2BQ96D98 161 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 LINGO1Q96FE5 620 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PLEKHG4BQ96PX9 1271 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF382Q96SR6 550 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TRIM15Q9C019 465 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NACA2Q9H009 215 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 BPIFA1Q9NP55 256 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 LHX3Q9UBR4 397 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TRMT6Q9UJA5 497 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 A0A0U1RQS6 177 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 FAM234BA2RU67 622 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 H3BNH8 94 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 EIF3FO00303 357 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ARPC2O15144 300 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PFDN6O15212 129 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 CRCPO75575 148 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TMCC1O94876 653 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SEC24AO95486 1093 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ATP6V1B1P15313 513 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SH3BGRP55822 239 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 UFM1P61960 85 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ERVK-8P63133 956 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TGFBIQ15582 683 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 Q6ZSR9 355 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PPP1R3BQ86XI6 285 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 EPHX4Q8IUS5 362 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ADGRG5Q8IZF4 528 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms