RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ATAD1Q8NBU5 361 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 FEM1CQ96JP0 617 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 PORCNQ9H237 461 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM184CQ9NVA4 438 aa12.93□□□□□ -0.34
SRGAP3-201ENST00000360413 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PCM1Q15154 2024 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SPAM1P38567 509 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ATXN7L3Q14CW9 347 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM185BQ9H7F4 350 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PEX14O75381 377 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PKMP14618 531 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MVKQ03426 396 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC13A2Q13183 592 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ARL9Q6T311 187 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC29A4Q7RTT9 530 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 OR6K6Q8NGW6 343 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 TXN2Q99757 166 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF358Q9NW07 568 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF318Q5VUA4 2279 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 RTTNQ86VV8 2226 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 COQ9O75208 318 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 HMGN1P05114 100 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PEX13Q92968 403 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 BORCS7Q96B45 105 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 TBL1XR1Q9BZK7 514 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MYNNQ9NPC7 610 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 NANSQ9NR45 359 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SCDO00767 359 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PRPS2P11908 318 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MTPNP58546 118 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 USP50Q70EL3 339 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 OR8K3Q8NH51 312 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 ASB9Q96DX5 294 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MKKSQ9NPJ1 570 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 LGALS13Q9UHV8 139 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 GSTM3P21266 225 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 FGL2Q14314 439 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MARCH9Q86YJ5 346 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SPATA22Q8NHS9 363 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 TLCD1Q96CP7 247 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 CSPG4P5Q96PW8 444 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 OR10A4Q9H209 315 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 UNKLQ9H9P5 680 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 OIP5O43482 229 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 CADM2Q8N3J6 435 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PACRGLQ8N7B6 248 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 C10orf82Q8WW14 230 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC7A8Q9UHI5 535 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 INMTO95050 263 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 RORAP35398 523 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC6A9P48067 706 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 FKBP1BP68106 108 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 SP2Q02086 613 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 NTRK3Q16288 839 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 HECTD2Q5U5R9 776 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 JSRP1Q96MG2 331 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 DUSP16Q9BY84 665 aa12.92□□□□□ -0.34
SRGAP3-201ENST00000360413 MEIS2O14770 477 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 MC4RP32245 332 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 NFE2L1Q14494 772 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRC37A5PQ49AS3 106 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 DLGAP1O14490 977 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 CYB5BO43169 146 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 MYCLP1P12525 358 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 C2orf80Q0P641 193 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 KLF1Q13351 362 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 WDR45BQ5MNZ6 344 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 RNF6Q9Y252 685 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 FSCN2O14926 492 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 LAG3P18627 525 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 FKBP1AP62942 108 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 ABRAXAS2Q15018 415 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 CCDC58Q4VC31 144 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM151BQ6UXP7 276 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 IFT27Q9BW83 186 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms