RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CLCA4Q14CN2 919 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 RPE65Q16518 533 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 SPRED3Q2MJR0 410 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 LIPJQ5W064 366 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 IL27RAQ6UWB1 636 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 ABRAXAS1Q6UWZ7 409 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PRR23CQ6ZRP0 262 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PARGQ86W56 976 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 DEFB119Q8N690 84 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 DNASE2BQ8WZ79 361 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 TUBGCP3Q96CW5 907 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 MIPEPQ99797 713 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 GSDMCQ9BYG8 508 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 TMEM168Q9H0V1 697 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 MIR1-1HGQ9H1L0 117 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 INTS7Q9NVH2 962 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 ARL8BQ9NVJ2 186 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PLAGL1Q9UM63 463 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 ABCA7Q8IZY2 2146 aa13.4□□□□□ -0.26
PDLIM5-203ENST00000359265 IGF2RP11717 2491 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 ATP6AP2A0A1C7CYW4 349 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 E7ENX8 843 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC28A1O00337 649 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 MANBAO00462 879 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 FFAR3O14843 346 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 UBDO15205 165 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 GPR42O15529 346 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 ATP6AP2O75787 350 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CBX6O95503 412 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 GNAZP19086 355 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CALB2P22676 271 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 AK4P27144 223 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 PRDX6P30041 224 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 HNF4AP41235 474 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SCTRP47872 440 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 RASSF2P50749 326 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 ATP4BP51164 291 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 STX1BP61266 288 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 NCALDP61601 193 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TAP2Q03519 686 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 KLF10Q13118 480 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SQLEQ14534 574 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TEAD4Q15561 434 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CYP2A13Q16696 494 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SOWAHCQ53LP3 525 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 XKR6Q5GH73 641 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TCHHL1Q5QJ38 904 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 THEMIS2Q5TEJ8 643 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TMEM198Q66K66 360 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 PMS2CLQ68D20 193 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 GRHL2Q6ISB3 625 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 OGFOD2Q6N063 350 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 LCTLQ6UWM7 567 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CHSY3Q70JA7 882 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TMPRSS11BQ86T26 416 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 LRRC56Q8IYG6 542 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 PHACTR4Q8IZ21 702 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SETD7Q8WTS6 366 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SMPDL3AQ92484 453 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 NSL1Q96IY1 281 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 C3orf30Q96M34 536 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 CAMK1GQ96NX5 476 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 IL17FQ96PD4 163 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 HAUS8Q9BT25 410 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 AKTIPQ9H8T0 292 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TM9SF3Q9HD45 589 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TBC1D29Q9UFV1 150 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 TAGLN3Q9UI15 199 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 G3BP2Q9UN86 482 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 COLEC10Q9Y6Z7 277 aa13.39□□□□□ -0.27
PDLIM5-203ENST00000359265 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 A0A1W2PR77 199 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 E7EQ34 232 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 BCAT2O15382 392 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 RGS14O43566 566 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ULK1O75385 1050 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 PRR35P0CG20 571 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 ESRRAP11474 423 aaPredicted RBP13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 F3P13726 295 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 CTSEP14091 401 aa13.38□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC2A4P14672 509 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms