RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ACOT12Q8WYK0 555 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 FCGR1BQ92637 280 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 SEC61A2Q9H9S3 476 aa17.96■□□□□ 0.47
SHANK1-202ENST00000359082 EI24O14681 340 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 NIPSNAP2O75323 286 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 CYP11A1P05108 521 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 TAS2R39P59534 338 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SLC3A1Q07837 685 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 NOX1Q9Y5S8 564 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 METTL21EPA6NDL7 271 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 HLA-DQB2P05538 268 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 C2orf27AQ580R0 203 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SUN3Q8TAQ9 357 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 RGMAQ96B86 450 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 BARD1Q99728 777 aaKnown RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 PARPBPQ9NWS1 579 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 CNTN3Q9P232 1028 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SALL4Q9UJQ4 1053 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 PLEKHA6Q9Y2H5 1048 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 HMGCS1Q01581 520 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 WSCD2Q2TBF2 565 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 CYP27C1Q4G0S4 372 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 OGFRL1Q5TC84 451 aaPredicted RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 GDPD4Q6W3E5 623 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SLC29A4Q7RTT9 530 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 NUDT13Q86X67 352 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SAMD14Q8IZD0 417 aaPredicted RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SH3RF2Q8TEC5 729 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 COL21A1Q96P44 957 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 DTLQ9NZJ0 730 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 IGSF9Q9P2J2 1179 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 PPM1HQ9ULR3 514 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 A0A0J9YVX5 310 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 WASHC1A8K0Z3 465 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 WASH3PC4AMC7 463 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 CDC7O00311 574 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 GABRDO14764 452 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 FCER2P06734 321 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 ACTR1BP42025 376 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 KCNJ5P48544 419 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 BLKP51451 505 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 CAPZA1P52907 286 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 ACTR1AP61163 376 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 WASH2PQ6VEQ5 465 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 PRR23BQ6ZRT6 265 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 IRF2BP1Q8IU81 584 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 LRRC57Q8N9N7 239 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 NFKBIDQ8NI38 313 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF350Q9GZX5 532 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 WNT9AO14904 365 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 ECI2O75521 394 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 HNRNPDQ14103 355 aaKnown RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 PHF19Q5T6S3 580 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF101Q8IZC7 436 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 C2orf15Q8WU43 125 aaKnown RBP17.95■□□□□ 0.46
SHANK1-202ENST00000359082 KCTD7Q96MP8 289 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 SLC22A4Q9H015 551 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 TLR6Q9Y2C9 796 aa17.95■□□□□ 0.46
SHANK1-202ENST00000359082 NPIPA5E9PKD4 350 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 AXIN1O15169 862 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 ACOX3O15254 700 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TNFP01375 233 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 GNSP15586 552 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 ARL3P36405 182 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 SPATC1Q76KD6 591 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 IL4I1Q96RQ9 567 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF471Q9BX82 626 aaPredicted RBP17.94■□□□□ 0.46
SHANK1-202ENST00000359082 MAGEE1Q9HCI5 957 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 AMBNQ9NP70 447 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 NPIPA1Q9UND3 350 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 MRPS17Q9Y2R5 130 aaKnown RBP17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TBX18O95935 607 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TPTEP56180 551 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 ERVK-8P63133 956 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 NPTX1Q15818 432 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 GXYLT1Q4G148 440 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 MMAAQ8IVH4 418 aaKnown RBP17.94■□□□□ 0.46
SHANK1-202ENST00000359082 PLAGL1Q9UM63 463 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.94■□□□□ 0.46
SHANK1-202ENST00000359082 A0A1B0GVT2 93 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 CYP17A1P05093 508 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM44Q2T9K0 475 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 CNPY1Q3B7I2 92 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 SIRPB2Q5JXA9 342 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM17Q86X19 198 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 CCDC107Q8WV48 283 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 COL20A1Q9P218 1284 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 DGKEP52429 567 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 OR4F3Q6IEY1 312 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 REM2Q8IYK8 340 aaPredicted RBP17.94■□□□□ 0.46
SHANK1-202ENST00000359082 LGI4Q8N135 537 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 TTLQ8NG68 377 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 UTS2RQ9UKP6 389 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 J3QLW9 94 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF19P17023 458 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 CD47Q08722 323 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 MERTKQ12866 999 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 PRAMEF14Q5SWL7 426 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms